Rattus norvegicus (rat): 679203
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Entry
679203 CDS
T01003
Symbol
Nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
679203 (Nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
679203 (Nelfcd)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
679203 (Nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
679203
NCBI-ProteinID:
NP_001258183
RGD:
1590753
Ensembl:
ENSRNOG00000047874
UniProt:
A0A8I6B5Y3
A6KL31
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All DBs
Position
3:183631968..183643088
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AA seq
591 aa
AA seq
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MAGPAPGTIMGEDYFGNASEWGEEADGGQHQEEDSGEGEDDAEVQQECLHKFSTRDYIME
PSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHL
KSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLI
SDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYL
FAQAMMSVLAQEEQGGSAVRRVAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAM
LSRGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHI
LAYAASVVETWKKNKRVSIGKDELKSTSKAVETVHNLCCNENKGASELVAELSTLYQCIR
FPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFET
EHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLD
VIAPPYTSDFVQLFLPILENDSIAGTIKAEGEHDPVTEFIAHCKSNFIVVN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtccagcgccgggtacgattatgggagaagactacttcgggaatgcgtctgag
tggggtgaagaggcggacggcggccagcatcaggaagaagattctggagaaggagaggat
gatgccgaggtgcagcaggaatgtctgcataagttttccacccgggactacatcatggag
ccctccatcttcaacactctgaagaggtatttccaagcaggagggtccccagaaaatgtc
atccagctcttatctgagaactatacggcggtggcccagactgtgaacctgctggctgag
tggctcattcagacaggtgttgagccagtgcaggtacaggagactgtggaaaaccacctc
aagagtttgctgatcaagcactttgaccctcggaaagcagattctatcttcactgaagaa
ggggagaccccggcttggcttgagcagatgatcgcacacaccacatggagagatctgttt
tataagttggctgaggcccatcctgactgtttgatgctcaacttcactgtgaagctcatc
tctgatgcaggctaccaaggtgagatcaccagcgtgtccacggcctgccagcagctggaa
gtgttctccagagtgctgcggacctctctagccacaatcttggacggaggagaagaaaac
ctggagaaaaatctccctgagtttgcaaagatggtgtgccatggggaacacacgtacctg
tttgcccaagccatgatgtccgtactggcccaggaggaacagggtggctctgcagtgcgc
agggtcgctcaagaagtccagcgcttcgcccaggagaaaggtcatgatgccagccagatc
acactggccttgggcacagctgcctcctacccccgtgcctgccaagcccttggagccatg
ctgtccaggggagccctgaatcctgcagacatcacggtcttgttcaagatgttcaccagc
atggaccctcctcctgtggagctcatccgggtgccagccttcctggacctgtttatgcag
tcgctcttcaagccaggggccaagatcaaccaggaccacaagcacaagtacattcacatc
ctggcttacgctgctagtgtggttgagacctggaagaagaacaagcgggttagcattggc
aaagatgagctcaagtccacgtcaaaggctgtagagaccgtccacaatctgtgctgcaat
gagaacaaaggggcctccgagctggtggctgagctgagcacactttatcagtgcattagg
tttccagtggtagcaatgggcgtgctgaagtgggtagattggactgtgtctgagccaagg
tacttccagctacagactgaccacactccggttcacctggccttgttggatgagatcagc
acctgccaccagctcctgcacccccaggtcctgcagctgctcgtcaagcttttcgagacc
gagcactcccagctagacgtgatggagcagctcgagttaaaaaagacgctgctggacagg
atggtgcacctgctgagccgtggctacgtcctccctgtggtcagctacatccgcaagtgt
ctggagaagctggacacggacatctcactcatccgctactttgtcactgaggttctggac
gtcatcgcccctccatacacctcagactttgtgcaacttttcctccccatcttggaaaac
gacagcattgcaggcaccatcaaggcagagggcgagcatgaccccgtgacggagttcatt
gctcactgcaagtctaacttcatcgtggtgaactga
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