Rattus norvegicus (rat): 679574
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Entry
679574 CDS
T01003
Symbol
Vom2r42l1
Name
(RefSeq) vomeronasal type-2 receptor 116-like
KO
K04613
vomeronasal 2 receptor
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rno04030
]
679574 (Vom2r42l1)
G protein-coupled receptors [BR:
rno04030
]
Others
Chemoreception
Vomeronasal pheromone
679574 (Vom2r42l1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Motif
Other DBs
NCBI-GeneID:
679574
NCBI-ProteinID:
XP_038956990
RGD:
1587109
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All DBs
Position
1:complement(149109324..149175988)
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AA seq
847 aa
AA seq
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MFTFLFALLVLELSFLLCSQIDNHCFWRLKTKKFWDGDKDIDCFFFIYTKFGHVKNEQFS
GDLDKRLTTKNIHLILTLYFALEEINMNPHILPNISLLVKIECSLLDDWRINSLSSKREE
YLPNYYCKNQRRYLIVLTGPMWLPSVIVGPLLYISKRPELYFGPFHPLLSSQELYPYLYQ
MTPKDTSLALAMVSLIVHFNWNWVGAVVSDDDPGYEFILELRREMQMNSVCLAFVSVIVS
DDILFVKRYNIYYNQITMSSAKVVIIYGDKESPLQLNFRLWHLIDIQRIWVTTSQWDMII
NNGKFLLLSSYGTLTFSHHYPELSGFKTFIQTAYPSNYSDDISLARLWWIYFNCSLSFSN
CKNLQTCSKEKIFRWLYRHHFEMSLSDTTYDLYNSVYAVAHTLQQMLLQQADSLQIDDGK
ELQFDPWQMVSFLKNVQFINPAGDKVNLNHKEKLDTEYDIHQTMDFLPNPVFKLKIGTFS
QNLPHGPQLYMLKEIIEWNTGHQQSPTSICSIPCSPGFRKSPQQGKPVCCFDCTPCPENE
ISNMTNMNQCIKCLNDQYANPGGTHCFKKVIVFLGYEDPLGMSMAILALCFSVLTAFVLG
IFLKHQGTPIVKANNRTLSYVLLTSLISCFLCPLLFIGHPNFVTCIMQQATFAVVFTVAA
STVLAKTIIVVLAFKITNSSRKMRWLLVSGAPKFIIPICTMIQLILCGIWLGTSPPFVDT
DGYVEKGHILIFCNKGSILAFYCVLGYLGSIAIGSFTLAFLARNLPDTFNEAKFLTFSML
VFCSVWITFLPVYHSTKGKSMVAVEVFCILASSAGLLICIFAPKCFIIMLRPEKKSFQKF
QNIHSKI
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgttcacttttctgtttgcacttcttgtcctggagctttcttttcttttgtgcagtcaa
attgacaaccattgtttttggagattaaaaaccaagaaattttgggatggagacaaagat
attgattgctttttttttatttatacaaaatttggacatgtaaagaatgaacagttcagt
ggggatctagacaagcggttgacaactaagaatatccatttgattttgactctttatttt
gcccttgaagaaataaacatgaacccccatattctacctaacatttcactgctagttaaa
attgaatgtagtctgctggatgattggagaataaacagcttatcttctaaaagagaagaa
tatcttcctaactactactgtaaaaatcagagaagatatttaattgtacttacaggacca
atgtggttaccatctgtcatagttgggccactcctatatatttctaagaggccagagctt
tacttcgggccatttcaccctctcttgagcagccaagaactgtatccgtatctttatcag
atgactcctaaggacacatctctggcactggccatggtttctttgattgtccatttcaac
tggaactgggtgggagcagttgtttcagatgatgacccaggttatgaatttatcttggaa
ttgagaagagaaatgcaaatgaacagtgtgtgtttagcctttgtgagtgtcattgttagc
gatgacatattatttgtgaaaaggtataatatctattacaaccagatcacgatgtcatca
gcaaaagttgtaatcatttatggagacaaagagtctcctctacagttgaactttagacta
tggcatttaatagatatccaaagaatctgggtcactacctcacagtgggatatgatcata
aataatggaaaattcctcctcctttcctcctatgggactctcactttttcacatcactat
cctgaattatctggttttaaaacatttatccagacagcatacccttcaaactacagtgat
gacatttcccttgctagattatggtggatatattttaattgttctttgtcattttctaat
tgtaagaatcttcaaacttgttcaaaggaaaaaatatttagatggttatacaggcaccat
tttgaaatgtctttgagtgatactacttatgacctatataattctgtgtatgctgtggct
cacacactccaacaaatgcttctgcaacaagcagatagcctgcaaatagatgatggaaaa
gaactgcaatttgacccttggcagatggtctccttcctgaaaaatgtccaatttataaac
cctgctggagacaaagtgaacctgaatcacaaggaaaaactggatacagagtatgacatt
caccagactatggattttttgccaaatcctgtatttaagctgaaaattggaacattttcc
caaaatctgccacatggtccacaattatatatgttgaaagaaataatagagtggaacaca
ggccatcaacagtctccaacctcaatttgcagtattccttgcagtccaggattcagaaaa
tcccctcagcagggaaagcctgtgtgctgttttgattgtacaccctgcccagagaatgaa
atttccaacatgacaaacatgaatcaatgtatcaagtgtctaaatgatcagtatgccaat
cctggaggaactcactgcttcaaaaaagttattgtattcctgggttatgaagatccattg
ggaatgtctatggctatcttggctctgtgcttctctgttctcacagcttttgttcttggt
atctttttgaagcaccaaggaacacccattgtcaaggccaataacagaactctcagctat
gttctactcacctccctcatctcttgttttctatgtcccttgctcttcattggtcatccc
aactttgtcacatgtatcatgcagcaggccacatttgctgttgtgttcactgtagctgca
tctactgtcttggcaaagacaattattgtagtattggccttcaagattactaattcaagt
agaaaaatgaggtggctgctggtatcaggggcacctaaattcatcattccaatttgcaca
atgattcaactgattctctgtggaatttggctgggtacttctcctccatttgttgatact
gatggatatgttgaaaaaggccacattttgattttctgtaacaaaggttcaattcttgct
ttctattgtgtcctgggatacttaggctccattgccattggaagtttcacccttgcattc
ttagccaggaatctgcctgacacattcaatgaagccaagttcctgacattcagcatgcta
gtattttgcagtgtctggatcacctttcttcctgtctatcacagcaccaagggcaagtct
atggtggctgtggaagttttctgtatattggcatctagtgcagggcttcttatttgcatc
tttgcaccaaagtgcttcattattatgttaaggcctgagaaaaaatcttttcagaagttt
cagaatatacattctaaaatttaa
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