Rattus norvegicus (rat): 679898
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Entry
679898 CDS
T01003
Symbol
Zmat2
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
679898 (Zmat2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
679898 (Zmat2)
Spliceosome [BR:
rno03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
679898 (Zmat2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
SNRNP27
zf-U1
C2H2-zf_KIN17
DUF6277
DUF4250
MG280
zf-C2H2
FMP33
DUF7828
Motif
Other DBs
NCBI-GeneID:
679898
NCBI-ProteinID:
NP_001129054
RGD:
1583592
Ensembl:
ENSRNOG00000016087
UniProt:
A6J341
A0A8I6AB48
LinkDB
All DBs
Position
18:28683617..28688252
Genome browser
AA seq
199 aa
AA seq
DB search
MASGSGTKNLDFRRKWDKDEYEKLAEKRLTEEREKKDGKPVQPVKRELLRHRDYKVDLES
KLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLD
QVKKRFEVNKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEE
DEMAAVMGFSGFGSTKKSY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggcagcgggacaaaaaacttggactttcgccgaaagtgggacaaagatgaa
tatgagaagctcgcggagaagagactcacagaagagagagaaaagaaggatggaaaacca
gtgcagccagttaagcgggagcttctacggcacagggattacaaggtggacttggagtcc
aagcttgggaagacaattgttatcaccaagaccaccccacagtctgaaatgggaggctac
tactgcaatgtctgtgactgtgtggtgaaggactccattaacttcctggatcacattaat
ggaaagaaacatcagcgaaacctgggtatgtctatgcgcgtggaacgttccactctggat
caggtaaagaaacgttttgaggttaacaagaagaagatggaggagaagcagaaagattat
gattttgaggaaaggatgaaggagctcagagaagaggaggaaaaggctaaagcatacaag
aaagagaaacagaaggagaagaaaaggagggccgaggaggacttgacttttgaggaggag
gatgaaatggcagctgtgatgggcttctctggctttggttctaccaagaagagttactga
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integrated database retrieval system
