KEGG   Rattus norvegicus (rat): 680020
Entry
680020            CDS       T01003                                 
Symbol
Pcdhb8
Name
(RefSeq) protocadherin beta 8 precursor
  KO
K16494  protocadherin beta
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    680020 (Pcdhb8)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   680020 (Pcdhb8)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th Cadherin_4
Other DBs
NCBI-GeneID: 680020
NCBI-ProteinID: NP_001014779
RGD: 1309895
Ensembl: ENSRNOG00000020073
UniProt: A6J364 G3V8N7
LinkDB
Position
18:29339476..29341815
AA seq 779 aa
METALAKTPEKRQVIFLAILLLLWESGSEAIRYSMPEETESGYLIANLAKDLGLQIGELS
TRGARIHHNGNKELLQLDAKRGNLLLKEKPDREALCGATEPCVLHFQIILENPVQFFQTD
LQLTDINDHSPEFPDTEMLLKIQESVQPGTVFPLKAAQDSDIGSNAVQNYTVNPNLHFHV
LTHSHTDGRKYPELVLDRALDREEQPELTLILTALDGGAPPKSGTTTVRIEVVDINDNAP
QFVQSLYAVEVPEDSPLNALVVTVSARDLDTGIHGNVAYSLFQGSGGLQPFVIDEISGEI
RLKGALDFEATPYYNMEIVATDSGGLSGKCTVSIQVVDVNDNAPKLTISSLTRSIPENAP
EAVVAVFSVSDPDSGDNGRVLCSIQNELPFLLKPTFKNFYTLVTESPLDRESRAEYNITI
SVSDLGTPRLTTQHTITVQVSDINDNAPTFTQTSYTLFVHENNSPALHIGTISATDADSG
SNGFINYSLLPPHDQQLALVSLISINSDNGQLFALRALDYEAVQAFEFHVGATDGGSPAL
SSQALVRVVVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDADSGQNAW
LSFQLLKATEPGLFNVWAHNGEVRTARLLSERDVPKHRLLLVVKDNGEPPRSASIMLQVL
VVDGFSQPYLPLPEVALNPTKEEDMLTLYLVIALASVSSLFLLSVLLFVGVRLCRKARAA
SLGDCSIPEGHFPGHLVDVSSAGTLSQNYHYEVCLTEDSGTSDFKFMNPIIPTSLLQDS
NT seq 2340 nt   +upstreamnt  +downstreamnt
atggagacagcgctagcaaaaacaccagagaaaaggcaagtcattttccttgctatattg
ttgcttttgtgggagtctggctctgaggcaattagatattccatgccagaagaaacggag
agtggctacttgatagctaacctggctaaagatcttgggctccagattggggaattgtcc
actagaggggcacgaatccatcacaatggtaacaaagagctcttgcagcttgatgcaaag
agagggaatttgctgctgaaggaaaaaccagatcgcgaggcactgtgtggggcgacagaa
ccctgtgtgctgcacttccagatcatactggaaaaccctgtgcagttctttcaaaccgac
ctgcagctcacagatataaacgaccactctccagagttccctgacacagaaatgctccta
aaaattcaagaaagtgtccagccagggactgtgtttcctctgaaggcagctcaggactct
gacatagggagcaacgctgttcagaactacacagtcaatcccaacctccatttccacgtc
cttactcacagtcacacagatggcaggaaatacccagagctggtgctggacagagccctg
gatagggaggagcagcctgagctcactttaatcctcactgctctggatgggggtgctcca
cccaagtctgggacaacgacggttcgaattgaagtcgtggacatcaatgataacgctccc
caatttgtacagtcgctctatgcggtggaggtccctgaagatagtcccctcaatgcctta
gttgtcacagtctctgccagagacttagatactgggatacatggcaatgtagcctactct
ctgtttcaaggcagtggaggtcttcagccatttgtgatagatgaaatttcaggagaaatt
cgccttaaaggggcattggattttgaggcaactccatactataacatggaaattgtagcc
acagacagcggaggtctttcgggaaaatgcactgtgtctatacaggtggtggatgtgaac
gacaacgcccctaaactcaccatatcttcgctcactcgttccatcccagaaaatgctcct
gaggctgtagttgctgttttcagtgtttctgacccagattctggcgataatggaagagtg
ttgtgttctattcagaatgaacttccatttcttttaaaacccacattcaagaacttttac
accttagtgacagagagccccctggacagagagagcagagctgagtacaatatcaccatc
tcagtctcagacctgggcacacccaggctcacaacccagcacaccataacagtgcaggtc
tctgacatcaacgacaacgctcccaccttcactcaaacatcttataccctgtttgttcac
gagaacaacagccccgccctgcacataggcaccatcagcgccacagatgcagactcaggc
tccaatggctttattaattactcactgctaccgccccatgaccagcagctggccctcgtc
tccctcatctccatcaactcagacaatgggcaactgttcgcactcagggcgctggactat
gaggccgtgcaggcctttgagttccacgtgggcgctacagatggaggctcacccgcgctc
agcagtcaggctctggtgcgcgtggtggtgctggacgacaatgacaatgcgcccttcgtg
ctctacccactgcagaacgcctctgcgccttgcacagagttactgcccagagcagcggag
ccaggatacctggttaccaaggtggttgctgttgatgctgactctggccagaatgcctgg
ctgtcattccagttgcttaaggccacagagcccgggctgtttaatgtgtgggcgcacaat
ggcgaggtacgcaccgccaggctgctgagcgagcgtgatgtgcccaagcacagactgctg
ctggtggtcaaggacaatggagagcctccacgctctgctagcatcatgctgcaggtgcta
gtggtggatggcttctctcagccctacctgcctctgccagaggtggcgctcaaccccaca
aaggaagaagacatgctcacactctatctggttattgctttggcttctgtgtcttcactt
tttctcttgtctgtgctgctgttcgtgggcgtgaggctgtgcaggaaggccagggcagct
tctctgggtgactgttctattcccgagggacactttccaggccacctggtggatgtcagc
agtgcgggaaccctgtcccagaattaccattatgaggtctgtctgactgaagactctggg
acctcagatttcaagttcatgaaccctatcattcccaccagtctccttcaggactcctag

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