Rattus norvegicus (rat): 680047
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Entry
680047 CDS
T01003
Symbol
Pcdhb9
Name
(RefSeq) protocadherin beta 9
KO
K16494
protocadherin beta
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
680047 (Pcdhb9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
680047 (Pcdhb9)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
680047 (Pcdhb9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
680047
NCBI-ProteinID:
NP_001102860
RGD:
1596840
Ensembl:
ENSRNOG00000020072
LinkDB
All DBs
Position
18:29379310..29382480
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AA seq
798 aa
AA seq
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MHFPIMEKLRKIHLNRQVMLFIFMMALVLVCSEATTRYSILEETESGSFVAHLAKDLGLG
AGELAARSARVVSDDYKQRLLLDPETGDLILREKLDREELCGSLDPCVLPFQVSLEKPVQ
YFQGELLIQDINDHAPEFPDRELLLKIPENSQPGTRFSLKLAQDLDVGNNGLQEYRVSTN
PHFHVLTRNNSEGKKYPELVQDRALDREEQAELSLTLIALDGGSPPRSGTALVRILIIDI
NDNAPEFVNSPYEVQVLESCPPDSPILTVLARDADAGNFGSVSYGLFQASDEIQQTFSIN
ETTGDMRLKKKLDFEKIKSYHVEIEATDGGGLSGRGSVMIEVLDVNDNAPELTISSLTSS
VPENAPETIISIFRVGDRDSGENGKAVCSISENLPFILKSTFKNFYTLVTESPLDRESRA
EYNITISVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISA
TDADSGSNAHITYSLLPPQNPQLALVSLISINADNGQLFALRALDYEALQAFEFYVGATD
QGSPALSSQALVHVMVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLITKVVAVDCD
SGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPARSAT
VTLHVLLVDGFSQPYLPLPEVARNAVQEDDDALTLYLVIALASVSSLFLLSVLLFVGVRL
CRRGREVSLGGCSIPDGHFPGHLVDVSGAGTLSQSYQYEVCLRGDSGTGEFKFLKPMVPN
AGIEIMESPHCRESFVFN
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcacttccccatcatggagaagctgaggaagattcacctaaacaggcaagtaatgctg
tttatttttatgatggctttggttctggtttgcagtgaggcaacaactcgatactctatt
ttagaggaaacagaaagtggctcctttgtggcccatctggccaaggatctgggtctggga
gctggggagctggctgccaggtctgcacgggtggtgtctgatgattacaagcagagattg
ctgctggatcctgagactggagatttgattctgagagagaaactagaccgggaagagctg
tgtggctctttggatccctgtgtgctgcctttccaggtgtctcttgaaaagccagtgcaa
tattttcaaggagaattattgatccaggacataaatgatcatgctccagaattcccagat
agagaattgctcttgaaaattccggaaaacagccagccaggcacacgattttcattgaaa
ttagcccaggatttggatgtgggcaacaatgggcttcaagagtacagagtcagcaccaac
cctcattttcatgtcctcactcgaaataatagtgaaggcaagaaatacccagagttggtg
caggacagagccctggacagagaggagcaggcagagctgagcttaaccctcatagctctg
gatggcgggtctccaccgaggtcaggaacagccttggttcgaatcctgatcatagacatc
aatgacaatgctcctgagtttgtgaacagcccctatgaggtgcaggttctagagagctgt
cccccagactccccaatcctgactgtgttagcacgggatgcagatgctggcaactttggg
agtgtttcctatggcttgttccaagcatcagatgaaatccaacaaacattctcaataaac
gaaactactggagacatgcgactgaaaaagaaattggattttgaaaaaattaaatcttat
catgtggaaatcgaggccacagacggaggagggctttctgggagaggttctgtgatgata
gaggtgttggatgtgaacgacaatgctccagagctgaccatatcttcactgaccagctca
gtcccagaaaatgctcctgagaccataatcagcatcttcagagttggagacagggattcc
ggagagaatggaaaggcggtttgctctatctcagaaaacctgccattcattctaaaatcc
actttcaagaatttctacactctggtgacagagagccctctggacagagagagtagagct
gaatacaacatcaccatctcagtctcagacctgggcacacccaggctcacaacccagcac
accataacagtgcaggtgtctgacatcaacgacaacgcccctgccttcacccaaacctcc
tacaccatgtttgtccgcgagaacaacagccctgccctgcacataggcaccatcagtgcc
acagatgcagactcaggctccaatgcccacatcacctactcactgctgccgccccaaaat
ccacagctggcccttgtctcgctcatctccatcaacgcagacaatgggcagctgttcgcg
ctcagggcgctggactatgaggccctgcaggccttcgaattctatgtgggtgccacagac
caaggttcaccagcgctcagcagccaggctctggtgcatgtgatggtgctggacgacaat
gacaatgcgcccttcgtgctctacccgctgcagaacgcctctgcaccctgcaccgagctg
ctccccagggcagcggagccaggatacctgatcaccaaggttgtggctgtggactgcgac
tctggccagaatgcctggctgtcattccagttgctcaaggccacagagcccgggttgttt
agcgtgtgggcacacaatggcgaggtacgcaccaccaggctgctgagcgagcgagatgtg
cccaagcacaggctacttctgctggtcaaggacaatggggaccctgcgcgctctgccaca
gtcacgttgcacgtgctacttgtggatggattttcacagccctatctgcctctgccggaa
gttgctcggaacgccgttcaggaagatgatgatgctcttacactgtacctggtcatagcc
ttggcatctgtgtcttctctcttcctcttgtctgtgctgctgtttgtgggggtgaggctg
tgcaggaggggcagagaggtctctctgggtggctgctctattcctgatggacactttcct
ggccacctggtggatgtcagtggagcagggaccctgtcccaaagttaccagtatgaggtg
tgtctgaggggagactctgggactggtgagttcaagttcctgaaacccatggtccccaat
gctgggatagaaattatggaaagtccccactgcagggaaagctttgtattcaactaa
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