Rattus norvegicus (rat): 680178
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Entry
680178 CDS
T01003
Symbol
Cldn20
Name
(RefSeq) claudin-20 precursor
KO
K06087
claudin
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04514
Cell adhesion molecules
rno04530
Tight junction
rno04670
Leukocyte transendothelial migration
rno05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
680178 (Cldn20)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
680178 (Cldn20)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
680178 (Cldn20)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
680178 (Cldn20)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
680178 (Cldn20)
04147 Exosome [BR:
rno04147
]
680178 (Cldn20)
Cilium and associated proteins [BR:
rno03037
]
Other cilia and associated proteins
Stereociliary proteins
680178 (Cldn20)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
680178 (Cldn20)
Exosomal proteins of colorectal cancer cells
680178 (Cldn20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
DUF981
Motif
Other DBs
NCBI-GeneID:
680178
NCBI-ProteinID:
NP_001102864
RGD:
1595446
Ensembl:
ENSRNOG00000023531
UniProt:
D3ZT28
A6KIQ7
LinkDB
All DBs
Position
1:46539039..46539698
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AA seq
219 aa
AA seq
DB search
MASAGLQLLAFILAVSGVSGVLAATLLPNWKVNADAGSTIVTAIVQVHGLWMDCTWYSTG
MFSCTLKYSILSLPVYVQAARATMVLACILSALGICTAIVGMKCTHLGGDAHTKSHISFA
GGVCFITAGISALIPTVWYTKEIISNFLDLTVPESHKYEPGGAVYIGFISAMLLLIAGII
FCISYIKKNQEPWIYPPKQRLTSTWQPKNRLAYNLKDYV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggccggtctccagctcctggctttcatcctggctgtgtctggggtctctgga
gtacttgctgccactctgctgccaaactggaaggttaatgcagatgcaggctccaccatt
gtaactgctattgtacaggtacatgggttgtggatggactgcacgtggtacagcactggg
atgtttagctgcactctgaaatactccattctgtcgctccccgtctatgtgcaggctgcg
agggctaccatggtcctggcctgcattctgtctgccttggggatttgtactgcgatagta
ggaatgaaatgcactcacttaggaggagacgcacacaccaagagtcacatttcctttgct
ggaggagtctgcttcatcaccgcagggatctctgctttaatcccaacagtgtggtacacc
aaagagatcatatccaactttttggatctgactgttccagaaagccacaaatatgaacct
ggaggagccgtgtacattgggttcatttcagcgatgttactacttatcgctggtattatt
ttctgcatttcttatataaaaaagaaccaagaaccatggatctaccctcccaagcagaga
cttacctctacctggcagccaaagaacaggttagcatacaacctgaaggattatgtgtaa
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