KEGG   Rattus norvegicus (rat): 680576
Entry
680576            CDS       T01003                                 
Symbol
Tet3
Name
(RefSeq) methylcytosine dioxygenase TET3 isoform X3
  KO
K24309  methylcytosine dioxygenase TET2/3 [EC:1.14.11.80]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    680576 (Tet3)
   03036 Chromosome and associated proteins [BR:rno03036]
    680576 (Tet3)
Enzymes [BR:rno01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.80  methylcytosine dioxygenase
     680576 (Tet3)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    680576 (Tet3)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    680576 (Tet3)
SSDB
Motif
Pfam: Tet_JBP
Other DBs
NCBI-GeneID: 680576
NCBI-ProteinID: XP_001057850
RGD: 1590584
Ensembl: ENSRNOG00000011387
UniProt: A6IAM2
LinkDB
Position
4:complement(117425106..117525495)
AA seq 1667 aa
MDSGPVYHGDSRQLSTSGAPVNGAREPAGPSLLGAAGPWRVDQKPDWDAASGPAHTARLE
DAHDLVAFSAVAEAVSSYGALSTRLYETFNREMSREAGNNGRAPRPESCSEGGEDLDTLQ
TALALARHGMKPPNCNCDGPECPDYLEWLEGKIKSAAMEGGQGRPRLPGTLPPSEAGLPA
PSTRPLLSSEVPQVPPLEGLPLSQSALSIAKEKNISLQTAIAIEALTQLSSALPQPSHST
SQASCPLPEALSPSAPFRSPQSYLRAPSWPVVPPEEHPSFAPDSPAFPPATPRTEFSEAW
STDTPPATPRNSWPVPRPSPDPMAELEQLLGSASDYIQSVFKRPEALPTKPKVKVEAPPS
SPAPAPSPISQREAPLPSSEPDTHQKAQTALQQHLHHKRNLFLEQAHDASFPTSTEPQAP
GWWAPPGSPAPRPPDKPPKEKKKKPPTPAGGPVGAEKTTPGIKASVRKPIQIKKSRSRDM
QPLFLPVRQIILEGLKPQASEGQAPTPAQLPVPPPASQGAASQSCATPLPPEPSLALFAP
SPSGDSLLPPTQEMRSPSPMVALQSGSTGGPLPPADDKLEELIRQFEAEFGDSFGLPGPP
SVPIQDPENQSTCLPTPESPFATRSPKKIKIESSGAVTVLSTTCFHSEEGGQEATPTKAE
NPLTPTLSGFLESPLKYLDTPTKSLLDTPAKKAQAEFPTCDCVEQIVEKDEGPYYTHLGS
GPTVASIRELMEDRYGEKGKAIRIEKVIYTGKEGKSSRGCPIAKWVIRRHTLEEKLLCLV
RHRAGHHCQNAVIVILILAWEGIPRSLGDTLYQELTDTLRKYGNPTSRRCGLNDDRTCAC
QGKDPNTCGASFSFGCSWSMYFNGCKYARSKTPRKFRLTGDNPKEEEVLRNSFQDLATEV
APLYKRLAPQAYQNQVTNEDVAIDCRLGLKEGRPFSGVTACMDFCAHAHKDQHNLYNGCT
VVCTLTKEDNRCVGQIPEDEQLHVLPLYKMATTDEFGSEENQNAKVSSGAIQVLTAFPRE
VRRLPEPAKSCRQRQLEARKAAAEKKKLQKEKLSTPEKIKQEALELAGVTTDPGLSLQGG
LPQQTLKPSLKVEPQNHFSSFKYSGNAVVESYSVLGSCRPSDPYSMSSVYSYHSRYAQPG
LASVNGFHSKYTLPSFGYYGFPSSNPVFPSQFLGPSAWGHGGGGGSFEKKPDLHALHNSL
NPAYGGAEFAELPGQAVSTDNHHPAPHHQQPAYPGPKEYLLPKVPQLHPASRDPSPFAQS
SGCYNRSIKQEPVDPLTQAEAVPRDSGKMSRTPLPEASQNGGPGHLWGQYSGGPSMSPKR
TNSVGGNWGVFPSGESPTIVPDKLNSFGASCLTPSHFPDSQWGLFTGEGQQSAPHPGGRL
RGKPWSPCKFGNGTSALSGPSLPEKPWGMGAGDFNSSLKGGPGFQDKLWNPVKVEEGRIP
TPGANQLEKAWQAFGMPLSSNEKLFGALKSEEKLWDPFSLEEGTAEEPLSKGVVKEEKTG
PGVEEDEEELWSDSEHNFLDENIGGVAVAPAHCSILIECARRELHATTPLKKPNRCHPTR
ISLVFYQHKNLNQPNHGLALWEAKMKQLAERARQRQEEAARLGLGQQEAKLYGKKRKWGG
AMVAEPQHKEKKGAVPTRQALAMPTDSAVTVSSYAYTKVTGPYSRWI
NT seq 5004 nt   +upstreamnt  +downstreamnt
atggactcagggccagtgtaccatggagattcaaggcagctaagcacctcaggggcgccc
gtcaatggtgctagagagcctgccggacccagtcttctgggagctgcgggtccttggcgg
gtagaccagaagcccgactgggacgctgcctcaggccctgctcacaccgctcgcctggaa
gatgcccacgatctggtggccttttcggctgtggccgaagctgtgtcctcttacggggcc
cttagcacccggctctatgaaaccttcaaccgtgagatgagtcgtgaggctgggaacaac
ggcagggcaccccggcctgagagctgctctgagggcggtgaagacctggacacgttacag
acggccctggccctggcgaggcatggcatgaaaccacccaactgcaactgcgatggccca
gagtgccctgactacctcgagtggctggaggggaagatcaagtctgcagccatggaggga
gggcaggggcggcccaggctcccaggcactctgcctccgagtgaggctggccttccagcc
ccaagcaccagaccactccttagctctgaggtcccccaggtacctcccctggagggcctg
cctctgtcccagagcgccctgagcattgccaaggaaaaaaacatcagcctgcagacagcc
atcgccatcgaggccctcacacagctctcctcagccctccctcagccttctcattccacc
tcccaggcttcttgtccactccctgaggccttgtccccttctgcccctttcaggtctccc
cagtcctacctccgggctccctcgtggcccgtggttcccccagaggaacatccatccttt
gctcctgacagcccagccttccctccagcaactccaagaactgagttttctgaagcatgg
agcactgacacccctccagcaacaccccggaactcctggcctgtacctcgcccaagcccc
gaccctatggctgaactggagcagctattgggcagcgccagtgattacatccagtcagta
ttcaagcggcctgaggcccttcccaccaagcccaaggtcaaggttgaggcccccccttcc
tcccctgctccagcaccatctcctatttcccagagggaggctcccctgccatcttcagag
cccgacacccaccagaaggcccagacagcgcttcagcaacaccttcatcacaagcgcaac
ctattcttggaacaggcccatgatgcctccttccctacttccacagagcctcaggctcct
ggttggtgggccccaccaggctcacctgccccacggcctcctgacaaaccacccaaggaa
aagaaaaagaagccccctaccccagctggaggtcctgtgggagcagagaaaaccacccct
gggatcaaggccagtgtccgaaagcccattcagatcaagaagtccaggtccagggacatg
cagcccctcttcctgcctgttaggcagattattctggaagggctaaaaccccaagcctcc
gaaggacaggcacctacacctgcccagctccccgtcccgccccccgcctcccagggtgct
gcctcccagagctgtgctacccctctacccccagaaccttctcttgcgctgtttgcacct
agtccctctggggacagcctgctgccccctactcaggaaatgagatcccccagccccatg
gtagccctgcagtcaggctccactggtggcccccttccccctgccgatgacaagctggaa
gagctcatccggcaatttgaggctgaatttggggatagctttgggcttcctggccctcct
tcggtgcccattcaagaccctgaaaaccaatcaacatgtctcccaactccggagagccct
ttcgccacccgctcccccaagaagatcaagattgagtcttcaggggctgtgactgtgctc
tcaaccacctgcttccattcagaagagggaggacaggaggccactcccaccaaggccgag
aacccactcacacccaccctcagtggcttcttggagtcacctcttaagtacctagacaca
cctacgaagagtctgctggacacacctgccaagaaggcccaggctgagttccccacctgc
gattgtgtcgaacaaatagtggagaaggatgaaggcccatattacactcacctgggatct
ggccccacagtagcctctatccgggaactcatggaggatcggtatggagaaaaggggaaa
gctattcggatcgagaaggtcatctacacgggcaaggaggggaagagttctcgaggctgt
cccattgccaagtgggtgatccgaagacacacactggaggagaagctgctgtgcctggta
cggcatcgggcgggccaccattgtcagaatgccgtgatcgtcatcttgatcctggcctgg
gagggcatccctcgcagccttggagacaccctctaccaggagctcaccgataccctccgg
aagtatgggaaccctaccagccggagatgtggcctcaatgatgaccgtacctgtgcttgc
caaggcaaagaccccaacacctgtggtgcctccttctccttcggctgttcatggagcatg
tacttcaatggctgcaaatacgcccggagcaagacgccacggaagttccgcctcacagga
gacaatccgaaagaggaggaggtgctccggaatagctttcaggacctggccactgaagtt
gctcccctatacaagcggctggcaccccaggcctatcagaaccaggtgaccaatgaggac
gtggcaatcgactgccgtctgggactgaaggaagggaggcccttctctggggtcacagcc
tgcatggacttctgtgcccacgcccacaaggaccaacataacctctacaatgggtgcact
gtggtctgcaccctgaccaaggaagacaatcgctgcgtgggccagatccccgaggatgag
cagctgcatgtgctacccctgtacaagatggccaccacggatgagtttggcagtgaggag
aaccagaacgcaaaggtcagcagtggggccatccaggtactcacagcattccctagagag
gtccggcggctgcccgagcctgccaagtcctgccgccaacggcagctggaagccaggaag
gcggcggccgagaagaagaagctgcagaaggagaagctaagcacaccagagaagatcaag
caggaagccctggagttggctggagtcaccactgacccaggcctgtctctgcagggtgga
ttgccccagcaaaccctgaagccctccctcaaggtggagcctcagaaccactttagctcc
ttcaagtacagcggcaatgctgtggtggagagctactcggtgctgggcagctgccggccc
tctgacccctacagtatgagcagcgtgtattcctatcactcacgctacgcacagcctggc
ctggcctccgtcaacggcttccactccaagtacacacttccttccttcggctactatggc
ttcccatctagcaaccctgtcttcccctcccagttcttgggtcccagtgcctggggacac
gggggcggcggaggcagttttgaaaagaagccagacctccatgctctacacaacagcctg
aacccggcctacggtggtgctgagtttgccgagctgcctggccaggctgtttccacagac
aaccaccaccccgcccctcaccaccagcagcctgcttacccaggccccaaggaatatctg
ctacccaaggtcccccagctccacccagcatccagggacccctctcccttcgctcagagc
tccggttgctataacagatccatcaagcaagagccagtcgaccctctgacccaggctgag
gccgtacccagagactctggtaagatgagtagaacgcccttgcctgaagcatctcagaat
ggaggacccggtcatctgtggggacagtactcaggaggcccaagcatgtccccaaagagg
actaacagtgtaggtggcaactggggagtgttcccttcaggggaaagccccaccattgtt
cccgacaagctcaattcttttggggccagctgtctcaccccttcacacttcccagatagc
cagtggggactgttcactggtgaaggtcagcagtcagccccgcatcccggaggacggctt
cgaggcaagccatggagcccttgcaagtttgggaatggtacctcggccttgtctggtccc
agcctgcctgagaagccatgggggatgggagcaggggatttcaactcctccctgaaaggt
ggccctgggttccaagacaagttgtggaatcctgtgaaggtggaggagggcaggattccc
acaccaggggccaaccagctggagaaagcctggcaggcctttggcatgcccttgagctcc
aacgagaagctatttggggccctgaagtcagaggagaagctatgggatcccttcagtctg
gaggaggggacagctgaggagcccctcagcaagggggtggtgaaggaagagaagactggg
cctggggtggaagaggacgaggaggagctgtggtcggacagtgaacacaacttcctggac
gagaacataggtggtgtggctgtggcccccgcccactgctccatcctcattgagtgtgcc
cgtcgagagctacatgccaccacaccactcaaaaaacccaaccgctgccaccccacccgc
atctcgctggtcttctaccagcacaagaacctcaaccagcccaaccatgggctggcgctt
tgggaggccaagatgaagcagctggcggaacgagcgcggcagcggcaagaggaggccgca
cgcctgggcctgggccagcaggaggccaagctctatgggaagaagcgaaaatgggggggt
gctatggtggctgagccccagcacaaagaaaagaagggggctgttcctacccggcaggca
ctggccatgcccacagactcggcagtcaccgtgtcctcttacgcctacacaaaggtcact
ggcccctacagccgctggatctag

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