Rattus norvegicus (rat): 680915
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Entry
680915 CDS
T01003
Symbol
Mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
680915 (Mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
680915 (Mbd4)
03400 DNA repair and recombination proteins [BR:
rno03400
]
680915 (Mbd4)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
680915 (Mbd4)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
680915 (Mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
680915
NCBI-ProteinID:
NP_001414177
RGD:
1585874
Ensembl:
ENSRNOG00000010919
LinkDB
All DBs
Position
4:complement(150565646..150577433)
Genome browser
AA seq
566 aa
AA seq
DB search
MESPSLGDNNVPSVTAGKSLVSDPPWDRCKEDVAVGLGGVGEDGKDLVISSECGSLLQEP
AASTLPSCTTVAECHKPVPCGWERVVKQRLSGKTAGRVDVYFISPQGSKFRSKRSLANYL
LKTGETCLKPEDFDFTVLSKGGINPGYKHQSLSAPASQQPNEADISKLNLRTRSKWKTDV
LPLPGGNSESPDSNSLSNSNSARLLLKEHKGIQDADSGKSRKPKIKVTVLKGIASQRTKQ
RCRKSPSDSTGRNRKRLCTVQKADTDSELVPQESRLHRTVCPADACARATVSLVREAKGL
GEEKSPSSDLRFTQVTSSITNKLYSTEAAGEATREATREQTFLESEEIRSKGEEEEAHLH
IDILQSGSETPSCSQAKKHLTSETFREDSIPRTQVEKRKTSLYFSSKYNKEALSPPRRKA
FKKWTPPRSPFNLVQETLFHDPWKLLISTIFLNRTSGKMAIPVLWEFLEKYPSAEVARTA
DWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKPWRYPIELHGIGKYGNDSYRIFCVNEWK
QVHPEDHKLNKYHDWLWENHEKLSLS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggagagcccaagccttggggacaacaatgtcccctccgtcactgctggaaagagccta
gtttcagaccctccctgggaccgctgcaaggaagacgttgctgtcggactgggaggagtg
ggtgaagatggaaaggacctggtgataagcagtgagtgtggctcccttctccaggagcct
gctgcttctactctgcctagttgtactacagtggcagaatgccacaagcctgtcccctgt
ggatgggaaagagttgtgaagcaaaggttatctgggaaaactgcaggaagagttgatgta
tactttatcagcccacaaggatcaaagttcagatcaaaacgttcacttgctaattatctt
ctcaaaactggagagacttgtcttaagcctgaagattttgattttactgtactgtctaaa
gggggcatcaatccaggttataaacaccaaagtttgtcagctccagcttcccagcagcca
aatgaagctgacatttcaaagctaaacctcaggacacgaagcaagtggaaaacagacgta
ttgcctctgcccggtggtaattcagagtctccagatagcaacagcctgtccaactctaac
tctgcccgtttgctattgaaagaacataagggcattcaggatgctgactctgggaagagc
agaaagcccaaaataaaggtgactgttttgaaaggaattgcaagtcagagaaccaaacaa
aggtgcaggaagagtccctcagattctactggaagaaacagaaaaagactatgtacagtt
cagaaagcagatactgatagcgagctagttccacaggaaagtcgactccacagaactgtc
tgccctgcagacgcctgtgcaagggcgactgtcagcttggttagggaagcaaagggcctg
ggagaagaaaaatcaccaagctcggatcttcgtttcacacaagtaacttctagcatcaca
aacaaattatattcaactgaagcagcaggtgaagcaacacgtgaagcaacacgtgagcag
acctttttagaatcagaggaaatcagatcgaagggagaagaggaggaggcacatttgcat
attgacattttacagagtggctctgaaacacccagctgctcacaagccaagaaacacttg
acttctgagacatttcgagaagacagcatcccacgaacacaggtagaaaaaaggaaaaca
agcctgtatttttccagcaagtacaacaaagaagctcttagccccccaagacgcaaagcc
ttcaagaaatggacccctcctcggtcacctttcaatcttgttcaagaaacacttttccat
gatccatggaagctcctcatctcaactatatttctcaatcggacctcaggcaagatggcc
atccccgtgctgtgggagtttctagagaagtacccttcagctgaagtggcccggactgct
gactggagggacgtgtcagaacttcttaagcctcttggtctctatgatctccgtgcaaaa
accatcatcaagttctcagatgaatatctgacaaagccgtggaggtatccgattgagctt
catgggattggtaaatatggcaacgactcctaccggatcttttgtgtcaatgagtggaag
caggtgcaccctgaagaccacaagttaaataaataccatgactggctttgggaaaatcat
gagaaactaagtctatcttaa
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