Rattus norvegicus (rat): 682138
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Entry
682138 CDS
T01003
Symbol
Ddx43
Name
(RefSeq) DEAD-box helicase 43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
682138 (Ddx43)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
682138 (Ddx43)
Spliceosome [BR:
rno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
682138 (Ddx43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
KH-I_KHDC4-BBP
ATG32_M
KH_PNO1_2nd
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
682138
NCBI-ProteinID:
NP_001414562
RGD:
1586947
Ensembl:
ENSRNOG00000050868
UniProt:
M0R9C6
LinkDB
All DBs
Position
8:88135255..88172872
Genome browser
AA seq
646 aa
AA seq
DB search
MSRRESAANASSSGVASRRSSTGSRGAERTATEEGNRRGRVGSRGAGGGWREPAGAAEAT
AASRREPPLCFGVKNDVVGAVIGRGGSKIREIQNTTNTRIQVIKGNPEAEIKIFGNKAMQ
TKAKTVIDNVVKKQQNYIPGHRVDIIAFQPTVGTDTSTSESVTDDQPLIDWDQIREDALK
WEKKKWADLPPIKKNFYIESATTSSMSQVQIDNWRKENFNITCDDLKDGEKRPIPNPICK
FEDAFHSYPEVMENIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLSYLMPGFI
HLDSQPLAREQRNGPGMLVLTPTRELALQVEAECSKYSYGDLKSVCVYGGGDRDGQIQDV
SKGVDIIIATPGRLNDLQMNNFVNLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRPDRQ
TIMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIITTEEEKRTHIQTFLE
NMSPKDKVIVFVSRKAVADHLSSDLILRHISVESLHGNREQSDREKALENFKTGKVRILI
ATDLASRGLDVHDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGMSITLITRNDWRIATEL
INILERANQNIPEELVLMAERYKANKLKREMEKKMGRPQGKPQKFY
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggcgggaatccgcagccaacgcttcctcctcgggcgttgcttcccggagaagc
tcgaccgggtcccggggcgccgaacggacggcgacggaggaggggaaccggagaggccgg
gtcggtagcaggggtgcgggcggcggctggagagagcccgcgggtgccgccgaggctacg
gccgccagccgccgtgaaccgccgctctgcttcggggtgaagaacgatgtggtgggcgcg
gtgataggtcgtggtgggtcaaaaattagagaaatccaaaatacaacgaacactagaata
caggtaataaaaggaaatcctgaggcagaaataaaaatttttggtaataaagccatgcaa
acaaaagcaaaaacagtgatagataatgttgttaaaaaacaacaaaattacattccagga
cacagagttgatattattgcattccaacctactgttggaacagataccagtacaagtgag
agtgtaacggacgaccagccattgatagattgggatcaaattcgagaagatgctttgaaa
tgggagaagaaaaagtgggcagatttacctccaattaagaaaaacttttatatagagtca
gcaacgacgagctcaatgtcacaagtgcagatagacaactggaggaaagaaaattttaat
ataacatgtgatgacttaaaagatggtgagaaacgtcctatccccaaccctatatgtaaa
tttgaagatgcctttcacagttacccagaagttatggaaaacattaaaagagcaggcttt
caaaaacctacaccaattcagtcacaggcgtggccaatagttctgcaaggaatagatctt
attggagtagcacagactggaacagggaagacactgtcctatttaatgcctggatttatt
catctagactctcaaccactagctagagaacaaagaaatggacccggcatgttggtcctt
acacccactcgggaattagcccttcaagtagaagctgagtgttctaaatattcatatggt
gatcttaaaagtgtttgtgtatatggcggtggtgatagagatggacaaattcaagatgtg
tcaaaaggtgtagacatcattattgcaactcctggaagattgaatgacctacaaatgaat
aactttgtcaacctgaaaagtgtaacctatttggttttagatgaagccgacaagatgctg
gacatgggattcgaaccccagataatgaagattttgttagatgtacgcccagaccgacag
actattatgacaagtgcgacttggccatatgctgtccgacgtcttgcacaatcttatttg
aaagagccaatgattgtctatgttggtactttggatctagttgctgtaagtacagtgaaa
caaaatataatcattaccacagaagaagagaaacgaactcatatccagaccttcctagag
aatatgtcacctaaagacaaagtcattgtctttgtcagcagaaaagctgttgctgatcac
ttatcaagtgatctcattctccgacacatatcagtggagtctctgcatggcaacagagaa
cagagtgacagagagaaagcattagagaactttaagacaggtaaagttagaatacttatt
gctactgacttggcatctcgaggtcttgatgtccatgatatcactcacgtctacaattac
gattttcctcggaacattgaagaatatgtacacagagtagggcgcactgggagagcaggg
cgcactggaatgtccattacccttatcacaagaaatgattggaggattgccactgaattg
attaatattctggaaagagcaaatcagaatatcccagaggaacttgtcttaatggctgag
agatacaaggcaaacaaactaaaaagagagatggaaaaaaaaatgggaagaccccaagga
aagccccagaagttttactaa
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