Rattus norvegicus (rat): 683603
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Entry
683603 CDS
T01003
Symbol
Zscan2
Name
(RefSeq) zinc finger and SCAN domain containing 2
KO
K09230
SCAN domain-containing zinc finger protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
683603 (Zscan2)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
683603 (Zscan2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_15
zf-C2H2_6
zf-C2H2_jaz
C2CH-4th_BIRD-IDD
SCAN
Zn_ribbon_8
C2CH-3rd_BIRD-IDD
Zn_ribbon_SprT
DUF7837
zf-C2H2_16
zf-C2H2_11
C1_4
DUF7565
zf-met
DUF7128
DUF7838
zf-C2H2_ZN142
DUF7836
zf-Di19
Zn_ribbon_GRF_2
TBPIP_C
CCHC_ZFPM2
MTNAP1_ZnF
zf-C2H2_STOP2_C
Rv1322
Ribosomal_aS21
Motif
Other DBs
NCBI-GeneID:
683603
NCBI-ProteinID:
NP_001414652
RGD:
1584548
Ensembl:
ENSRNOG00000022164
UniProt:
A6JCD2
F1M9Z0
LinkDB
All DBs
Position
1:144243082..144258192
Genome browser
AA seq
614 aa
AA seq
DB search
MAAEVPAVSTPLSPLAQVPQEEDEQAEVTTMILEDDSWVQEAVLQEDGPESEPFPQSTGK
GSPQEEGTAEGPRGALVRFRELCRRWLRPEVHTKEQMLTVLPREIQAWLQEHRPESSEEA
VALVEDLTQTFPHNDFEIQSENGENSNQDVFEDVESHETFLKIPGGEGGQQSDGESDFER
DCGSGGAQGNVPGEEHRDLPSEGREVGQLIGLQGTYLGEKPYECPQCGKTFSRKSHLITH
ERTHTGEKYYKCEECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRIH
TGEKPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEK
PYACKECGESFSYNSNLIRHQRIHTGEKPYKCTECGQKFSQSSALITHRRTHTGEKPYQC
SECGKSFSRSSNLATHRRTHLVEKPYKCGVCGKSFSQSSSLIAHQGMHTGEKPYECLTCG
ESFSWSSNLIKHQRIHTGEKPYKCGDCGKCFSQRSQLVVHQRTHTGEKPYQCLMCGKSFS
RGSILVMHQRAHLGEKPYRCPECGKGFSWNSVLIIHQRIHTGEKPYKCPECGKGFSNSSN
FITHQRTHLKEKLY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgaagtgccagcagtgagcactcccctcagccctttggctcaggtgcctcaa
gaagaagatgaacaggcagaggttaccactatgatcctggaggatgattcgtgggtacag
gaagcagtgctgcaggaggatggccccgagtctgagccctttccccagagtactggaaaa
ggcagccctcaagaggagggtacagctgagggacctcggggtgcgcttgtccgatttcgg
gagctctgtcggcgctggctgaggccagaggtgcacactaaggaacagatgctgactgtg
cttccaagagagattcaggcctggctgcaagaacatcgtcctgagagcagcgaggaggca
gtggccctggtggaagacttgacccagacttttccgcacaatgattttgagatacagagt
gagaatggggagaactcaaatcaagacgtgtttgaggatgtggaatcacacgagacgttc
ttgaaaatccctggaggggagggtggtcagcagtcggatggggagagtgactttgagaga
gactgtggctcaggaggcgcccagggaaatgtcccaggtgaggagcacagggacctgcca
tcggaaggaagggaagttggccagctaataggccttcagggcacctacctgggtgagaag
ccttatgagtgtccccagtgtgggaaaactttcagccggaagtcccacctcatcacccat
gaacggacgcacacaggagagaagtactacaaatgtgaggagtgtgggaagagctttagt
gacggctcgaacttcagtagacaccaaacgactcacaccggagagaaaccgtacaaatgc
cgggactgtgggaagagctttagccggagcgcgaaccttatcacgcaccagaggatccac
acaggcgagaagcctttccagtgtgccgagtgtggcaagagcttcagccggagccccaac
ctcatcgctcatcagcgcacgcacacaggtgaaaaaccgtactcatgccctgagtgtggg
aagagctttggcaaccgatccagccttaatactcaccagggaattcacactggagaaaaa
ccctatgcgtgtaaggaatgtggcgaaagcttcagttacaactccaacctgatcagacac
cagaggatccacacgggagagaaaccatacaaatgtaccgagtgcggacagaagttcagc
cagagctcagcgctcattacccaccgaagaacacacacgggggagaagccgtatcagtgc
agcgagtgcggcaaaagcttcagccgcagctccaatctggccactcaccggcgaacccac
ctggtggagaagccctacaagtgtggggtgtgtggcaagagcttcagccagagctccagc
ctgatcgcacaccagggcatgcacacgggggagaagccctatgagtgccttacgtgcgga
gagagcttcagctggagctccaacctcatcaagcaccagaggatccacaccggggagaag
ccatacaaatgcggcgactgtgggaaatgcttcagccagcgctcgcagctggtagtgcac
cagcggactcacacgggggagaagccctaccagtgcctcatgtgtgggaagagcttcagc
cggggttccattctggtaatgcaccagcgcgcgcacttgggagagaagccttacaggtgc
cccgagtgtgggaaaggcttcagttggaactcagttctcatcatacaccagcggattcat
acgggagagaagccctacaagtgccccgagtgtggcaaaggcttcagcaatagctccaac
tttatcacgcaccagaggactcacctgaaagagaaactttactga
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integrated database retrieval system
