Rattus norvegicus (rat): 683927
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Entry
683927 CDS
T01003
Symbol
Cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
683927 (Cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
683927 (Cstf2)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
683927 (Cstf2)
U7-dependent histone pre-mRNA processing factors
683927 (Cstf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
683927
NCBI-ProteinID:
NP_001124486
RGD:
1596566
Ensembl:
ENSRNOG00000048025
UniProt:
B4F7F1
LinkDB
All DBs
Position
X:101546809..101572760
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AA seq
575 aa
AA seq
DB search
MAGLPVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGESIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLISGNPQPVHVAGPGSGPNVSMNQQNPQAPQAQSLSGMHVN
GAPPMMQASMPGGVPAPVQMAAAVAGPGPGSLAPAGVMQAQVGMQGAGPVPMERGQVPMQ
DPRAAMQRGALPANVPTPRGLLGDAPNDPRGGTLMTVTGEVEPRAYLGPPPPPHQGPPMH
HVPGHEGRGPPPHDMRGGPLAEPRPLMAEPRGPMLDQRGPPLDARGGRDPRGLDARGMEA
RAMEARGLEARAMEARAMEARAMEARAMEARAMEARAMEARGMDTRGPVPGPRGPIPSGI
QGPNPMNMGAVVPQGSRQVPVMQGAGMQGASMQGGSQPGGFSPGQSQVTPQDHEKAALIM
QVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgcctgttagagaccctgcggtggatcgttctctgcgttctgtattcgtg
gggaacattccttatgaagctactgaagaacaactgaaggacatcttctctgaggttggg
cctgttgttagtttcagattggtatacgatagggagacaggaaaaccaaagggttatggc
ttctgcgaataccaagaccaagagacagcacttagtgccatgcggaacttgaatgggcgt
gaattcagtgggagagcacttcgagtggacaatgctgccagtgaaaagaacaaagaggaa
ctgaagagccttggcactggtgcacctgtcatagagtcaccttatggagaaagcatcagc
cctgaggatgcccctgaatccattagcaaagctgttgccagtcttccgccagaacagatg
tttgaactgatgaaacaaatgaagctctgtgtccagaatagtccccaggaagcacgaaac
atgttgcttcagaacccacagctggcttatgctttgctgcaagcacaggtagtgatgaga
attgtggatcctgagattgccctgaaaattctgcaccgccagacaaatatcccaacgctg
atttcaggcaaccctcagccagtccatgttgccggacctggctcaggacccaatgtttca
atgaaccagcagaatcctcaggcccctcaggctcaatctttgagtggaatgcatgtcaat
ggcgcacctcctatgatgcaagcttctatgccaggtggagttccagcaccagtgcagatg
gcagctgctgtagcaggacctggccctggttccttagcccctgcaggagtcatgcaagcc
caagttggaatgcaaggagctggaccagtgcccatggaacgaggacaagtgccaatgcaa
gaccccagagcagctatgcagcggggagccttgcctgccaacgtcccaactcctcgtggt
cttttaggtgatgctcccaatgatccacggggaggcactttaatgaccgtaactggagaa
gtagaacctagagcttacctgggaccaccaccaccacctcatcagggcccaccgatgcac
cacgttcctggccatgaaggtcgtggaccaccaccgcatgacatgagaggaggaccgtta
gctgagcccagaccgttaatggcagagccaagaggacctatgctagatcagaggggtcca
ccgttggatgccagaggtggaagagatccccgaggattagatgcacgagggatggaggcc
agagccatggaagccagaggactggaagcccgtgccatggaagcccgtgccatggaagcc
cgtgccatggaagctcgtgccatggaggcccgagccatggaggctcgtgccatggaggcc
agaggcatggataccagaggcccagtacctggacctagaggacctatacctagtggaatc
caaggccccaatccaatgaacatgggggcagttgttccccagggatccagacaggtccca
gtcatgcagggagcaggcatgcaaggagcaagcatgcaaggtggaagccagcctggtggc
tttagtcctggacagagccaagtcacaccccaggatcatgagaaggctgctttgattatg
caggtccttcaactcactgcagaccagattgccatgctgcctcctgagcaaagacagagc
atcctaatcttaaaggaacagatacagaaatccaccggggcaccttga
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