Rattus norvegicus (rat): 684545
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Entry
684545 CDS
T01003
Symbol
Nlrp2
Name
(RefSeq) NLR family pyrin domain containing 2
KO
K19409
NACHT, LRR and PYD domains-containing protein 2
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rno04054
]
684545 (Nlrp2)
Pattern recognition receptors [BR:
rno04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
684545 (Nlrp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
PYRIN
LRR_6
NLRC4_HD2
LRR_4
NOD2_WH
AAA_22
nSTAND3
AAA_33
AAA
AAA_16
Mg_chelatase
AAA_19
RNA_helicase
AAA_18
Viral_helicase1
AAA_28
CAMSAP_CH
NB-ARC
AAA_5
AAA_24
AAA_17
TsaE
AAA_30
AAA_25
Motif
Other DBs
NCBI-GeneID:
684545
NCBI-ProteinID:
NP_001413839
RGD:
1589140
Ensembl:
ENSRNOG00000049759
LinkDB
All DBs
Position
1:complement(78557956..78597160)
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AA seq
1048 aa
AA seq
DB search
MEHSDQLGFNLKDVLKKLDKTELNNFKSTLKSCSLPQTMKQISKLTMDLANGAQLAEILT
DYCPNDWVKRVTFKILEEINRADLAELVMKQVEEAASKASEEKVSSKPREPLKTSLFPQD
FVQGDERPEHKHKKEWRNMYTEKWKKNFWPKCNKEIYVDTESYRTLLTLCNPKIEMPFAY
TIVLHGPPGSGKTTMARRLMLEWSESKQAQSFSCAFYISCRKLNNSKPCTFAHLLSMNNP
SWRYYMIRRLVLSEQFLFVVDGFDELTFPAGALLRDICGDWNTVKPVEVLLSSLLMRKME
PHSTLLVTTQTQSLHQIYLMVDQPVLVETQGFLEPEKQEYFQQYFEDEEGEEEGEGEGKA
LRALKEVKCNEALFQMASLPAACGIFCLCLELGMKKGEDLALTCQTYTSMFLNFLCRVFL
QEACDGHLNKQLQILFKKICILAADSLLEQVPILCEEDFLKLKLNLNKLHPVVYRCIFLE
DSSCTNCLSFICLSIQQLLAAIIFVQELGQESKDVSKYSIQKMLSREARLKNPNLSGVLP
FVFSLLNKTHIQELETIFGCQISMGVKRKFLECELGENKPFLLLMDLQEIFSCLYESQEE
EFVKEAMALFGEVSLHLKTNMDLVHASFCLKNSQNLQTMFLKVEKAVFPENFATLESTAE
DQRFQDKKCMLTLWTDFCDTFHSNEKLAFLEIHESFLNSSSLEILCEKLSSAPCHLQKVV
LKNISPDDAYEKLCLIFCGYETISHLTLQGGKLDSMLHSLCKVVKNPACNLKFLSLGSCS
TTAQKWDDFFPALKANQSLISLDLTDNNLLDKGVRLLCNTWKQSKCILQRVSLENCHLTE
VCCKDLSSVLMVSQTLTHLSLAKNELGDNGVKKLCESLSFPKCKLQTLVLWSCNITSNGC
HYLSKMLGQAPSLKHLDLGLNRIGTTGAKFLCEALKSPRSNLKSLWLCGCSIIPTNCKDF
SEILRSNKSLNTLDLSQNVMGTDAVKIFCESLKLQICPLQTLRLKFDEANPSIQKLIQEM
KESHPQLSITSDQVDPKKKSHSFPHFIF
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggaacattctgatcaactgggtttcaacctaaaagatgtcctgaaaaagctagacaag
accgagttgaacaatttcaagagtacattgaagagctgttctctaccacagacaatgaag
cagatctccaagctgacaatggacctggccaatggagctcaactagcagaaattctcaca
gactactgccccaatgattgggtaaagagagttaccttcaagatcttagaggaaataaac
cgtgcagatctagctgagttagtaatgaagcaagtcgaagaagcagcatcaaaagcatcg
gaagaaaaggtttcttctaaaccaagagaacccttgaagacatcacttttcccacaggat
ttcgttcaaggagatgaaagaccagagcacaaacataaaaaggaatggaggaatatgtac
actgaaaaatggaagaagaacttctggcccaaatgcaataaagaaatctatgtggatact
gagagctacaggacactcctgacattgtgtaacccgaagatagaaatgccatttgcttat
acaattgtgctgcatggccctccaggctctggaaaaaccacaatggcaaggaggctaatg
ctagaatggtcagagagtaagcaggcccagagtttttcatgtgccttctacatcagctgc
aggaaacttaataatagtaaaccttgcacttttgcccacctcctctccatgaacaatccc
tcctggagatactatatgattcggcgtctagtcctgtcagaacaattcttatttgtggta
gatggttttgatgagctgacattcccagcaggagctctgctccgtgatatctgtggtgac
tggaacacagtgaagcctgtagaggtcttactgagcagtttgctaatgaggaagatggaa
cctcatagcacactgctggtaaccacacaaacacagtctttgcaccaaatctacctcatg
gtagatcagcctgtcctagtagaaactcagggtttcttagagccagaaaaacaggagtac
tttcagcaatactttgaagatgaggagggtgaggaagagggtgaaggtgagggaaaggca
ctgagagctcttaaggaagttaaatgcaatgaagctctcttccaaatggcctcacttcct
gctgcatgtggaatattctgcctctgtctggagctaggaatgaagaagggggaagacctg
gctctgacatgtcagacctacacctctatgttcctgaacttcctctgcagagtcttccta
caagaagcctgtgatggccatctcaacaagcaactccaaatcttattcaagaaaatatgt
atcctggctgccgatagtctcttagaacaggtgcccatactctgtgaagaagacttcttg
aaattaaaattgaacctgaataaattgcatcccgtggtgtacaggtgcatctttcttgag
gacagttcctgtacaaactgtctttctttcatctgcctcagtatccagcagctcctggct
gccataatatttgttcaggaactcgggcaagaaagcaaggatgtctctaaatatagtata
cagaagatgctttctagggaagcaaggttgaaaaaccccaacctgtctggagtgctgcca
tttgtatttagcctcctgaacaaaactcatattcaagagctggagaccatttttggctgc
caaatatcaatgggggtcaagagaaaattcctggagtgtgagttgggggaaaataaaccc
ttcctattactgatggatctgcaagagatcttttcctgtctctatgaatctcaggaggag
gagtttgtgaaagaagccatggccctctttggggaagtctccttgcatttgaaaaccaac
atggacctcgtccatgcttcattctgcctcaagaactctcagaacttgcagacaatgttc
cttaaagtagaaaaggcagtcttcccagagaattttgctacactggagtccacagctgag
gaccaaaggttccaggacaaaaaatgcatgctaactctctggacagacttttgtgacaca
tttcattcaaatgagaaactggcctttctagaaatccacgaaagcttcctcaacagctcc
tcactggagattctttgtgaaaagctgtcctctgctccctgccatctccagaaagtggtc
ctcaaaaatatttccccagatgatgcgtatgagaaattatgcctcattttttgtggttat
gaaaccatctcacatctgactttgcaaggtggtaaactggatagcatgcttcactcactg
tgtaaggttgtgaaaaatccagcatgcaacctgaagtttctcagcctgggatcttgttct
accactgctcagaaatgggatgacttcttcccagccctgaaagccaatcaatccctgata
agtctggatctcacagacaataatctcttggacaagggtgtgaggcttctatgtaatact
tggaagcaatcaaagtgcatactgcagagggtatcgttggagaactgtcatctcactgaa
gtctgttgcaaggacctctcttctgttctgatggtcagccagactctaacacaccttagc
ctggccaagaatgaacttggagataatggagtgaaaaaactatgtgaaagcttaagcttc
cccaaatgcaaactacagaccctggttctgtggtcctgtaacatcaccagcaatggttgc
cactatctctcaaagatgctcggacaagcaccaagcctgaagcacttggatctggggcta
aatcgcattggaaccacaggtgcaaagtttttgtgtgaggctttgaagagccccaggagt
aacttgaaaagtttgtggctgtgtggatgctccatcattccaacgaactgcaaagacttc
tctgagattctcagaagcaacaagagcctgaacactctagacctgtctcagaacgtcatg
ggaactgatgcagtaaagatattctgtgaatccttgaaactccaaatttgtcccctccaa
acactcaggttgaaatttgatgaagctaaccccagtatccagaagctgatccaagaaatg
aaggagagccatccacaattgagcattaccagtgaccaagtggatcctaagaaaaagagt
cattctttccctcatttcattttttga
DBGET
integrated database retrieval system
