Rattus norvegicus (rat): 687001
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Entry
687001 CDS
T01003
Symbol
Hdac9
Name
(RefSeq) histone deacetylase 9
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04613
Neutrophil extracellular trap formation
rno05034
Alcoholism
rno05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
687001 (Hdac9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
687001 (Hdac9)
09165 Substance dependence
05034 Alcoholism
687001 (Hdac9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
687001 (Hdac9)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
687001 (Hdac9)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
687001 (Hdac9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
687001
NCBI-ProteinID:
NP_001186974
RGD:
1310748
Ensembl:
ENSRNOG00000004158
UniProt:
E5RQ38
LinkDB
All DBs
Position
6:complement(56489472..57351654)
Genome browser
AA seq
1068 aa
AA seq
DB search
MHSMISSVDVKSEVPMGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVER
HRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVGRHPKLWY
TAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDTKDDFPLRKTASEPNLKVRSRLKQKVAER
RSSPLLRRKDGNLVTSFKKRVFEVAESSVSSSSPGSGPSSPNNGPAGNVTENEASVLPPT
PHPEQLVPQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSPLSASNSLKDKQKCETQM
LRQGVPLPGQYGSGIAASSSHAHVAMEGKPNSSHQALLQHLLLKEQMRQQKLLVAGGVPL
HPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQY
QQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMEERATSKDSGTGKDSSACVEDTL
GQVGAVKVKEEPVDSDEDAQMQEMECGEQAAFMQQTPLLESSHTRALSVHQARLAAAGID
GLEKHGLLSRTHSSPAPSMSPHPAADCPRQPASATGIAYDCLMLKHQCICGNSTTHPEHA
GRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTSPLDGQKLDPRTLL
GDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVR
PPGHHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSIL
YISLHRYDEGNFFPGSGAPNEVGVGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVVMPV
AREFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLMTLANGRVALALEGGHDL
TAICDASEACINALLGNEPGSLEEDVLHQSVNTNAAASLQKTIEIQSKYWKSIKMVAVAR
GCALPASQLQEETETVSALASLTVDVEQPFAQEDGRTAGEPMEEEPAL
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtatgatcagctcagtggacgtgaaatcagaggttcctatgggactggagccc
atctcacctttagacctaaggacagacctcaggatgatgatgcctgtggtggatcctgtc
gtccgcgagaagcaactgcagcaagagttacttcttatccaacagcagcagcaaatccag
aagcagctcctgatagccgagtttcagaagcagcacgagaatttgacaaggcagcatcaa
gcacaacttcaggagcacatcaagttacaacaggaacttctagccataaaacaacagcaa
gaactcctagaaaaggagcagaaactggagcagcagaggcaagaacaggaagtagagagg
catcgcagagagcagcagcttcctcctctcagaggcaaagatagaggacgagaaagggcg
gtggcaagcacagaggttaagcagaagcttcaagaattcctattgagtaaatcagcaacg
aaagacactccaaccaatggaaagaatcattccgtgggccgccatcccaagctctggtac
acggctgcccaccacacatcactggatcaaagctctccacccctcagtggaacgtctcca
tcctacaaatacacattaccaggagcccaagataccaaggatgatttccccttgcgaaaa
acagcctcagagcccaacttgaaggtgcggtccaggttaaaacagaaagtggcagagagg
agaagcagccccttactcaggcggaaggatggaaatcttgtcacttcattcaagaagcga
gtgtttgaggtggcagaatcctcggtcagtagcagctctccagggtcaggtcccagttca
ccaaacaatgggcctgctggaaatgttaccgaaaacgaggcttcagttctgcctcccacg
cctcaccccgagcagctggttccacagcagcgcattctgattcacgaagattccatgaac
ctgctgagtctctacacctccccgtccctgcccaatatcaccctgggacttccagcagtg
ccatccccactcagtgcttctaattccctcaaagacaagcagaagtgtgagacacagatg
ctcagacaaggtgtccctctgcccggccagtatggaagtggcattgcagcatcctccagc
catgctcatgtagcaatggagggcaaaccgaacagcagtcaccaagctctcctgcagcac
ctcctgctgaaggaacaaatgagacagcaaaagcttcttgtggctggcggagttccatta
cacccccagtctcctttggcaacaaaagaaagaatttcaccaggcattagaggtacccac
aaattgccccgccacagacccctcaatcgaactcagtctgcacctttgcctcagagcaca
ctggctcagctggtcattcagcagcagcaccagcagttcctggagaagcagaagcaatac
cagcagcagatccacatgaacaaactgctatcgaaatctattgagcaactgaagcaacca
ggcagccatcttgaagaggcagaggaggagcttcagggggaccaagccatggaagagaga
gcaacgtctaaggacagcggtaccgggaaggacagcagtgcttgtgtggaggacacactg
ggacaagttggggctgtgaaggtcaaggaggaacccgtggacagcgacgaagatgctcag
atgcaggaaatggaatgtggggagcaggctgcttttatgcaacagacgcccttgctggag
tcctcacacacgcgtgcactctcagtgcaccaggctcggctggctgcagctggcatcgat
ggattagagaaacatggactcctctccaggacccattcttctcctgcaccctccatgtca
cctcacccagccgcagactgtccccgccagcctgcctctgccactggaattgcctatgac
tgtctgatgctgaaacaccagtgcatctgtggcaattccaccacccaccctgagcatgct
gggcgaatacagagcatctggtcacggctgcaagaaaccgggctgctaaataaatgtgag
cgaattcaaggtcgaaaagccagcctggaggaaattcagcttgttcattctgaacatcac
tcactactgtatggcaccagccccctggacggacagaagctggaccccaggacactccta
ggtgatgattctcgaaaattcttttcctcgttaccttgtggtggactcggggtggacagt
gacaccatttggaatgagctgcactcgtccggtgctgcacgcatggctgttggctgtgtc
attgagctggcttccaaagtggcctcaggagagctgaagaatgggtttgctgttgtgagg
cccccaggccatcatgctgaagaatctgcagccatggggttctgcttttttaattcagtc
gcaattacggccaaatacttgagagaccaactaaatataagcaagatattgatcgtagat
ctggatgttcaccatggaaacggtacacagcaggccttttatgctgaccccagcatcctg
tacatttcactccatcgctatgatgaagggaactttttccctggcagtggcgccccgaat
gaggttggagtaggtctgggagaaggctacaatgtaaacattgcctggacaggcggcctt
gacccccctatgggagatgttgagtaccttgaagcattcaggactgtcgtgatgcctgtg
gccagagagtttgatccagacatggtcctggtttctgctggatttgatgcattggaaggc
cacacccctcccctagggggttacaaagtgacagcaaaatgctttggtcatttgacgaag
cagctgatgacattggctaatggacgtgtggcattggctcttgaagggggacatgatctg
acagccatctgtgatgcctcggaggcctgcataaatgcccttctaggaaatgagcccggg
tctcttgaggaagatgttctccaccagtctgtgaatacgaatgcagccgcttctttacag
aagaccattgaaatccaaagcaagtattggaagtcgatcaagatggtggctgttgcaagg
ggctgtgctctgcctgcttctcagctgcaagaggagacagagaccgtttctgcattagcc
tccctgacggtagatgtggaacagccatttgctcaggaagatggcagaactgctggtgag
cccatggaagaggagccagccttgtga
DBGET
integrated database retrieval system
