Rattus norvegicus (rat): 688288
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Entry
688288 CDS
T01003
Symbol
Eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno03015
mRNA surveillance pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
688288 (Eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
688288 (Eif4a3)
03015 mRNA surveillance pathway
688288 (Eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
688288 (Eif4a3)
03041 Spliceosome [BR:
rno03041
]
688288 (Eif4a3)
03009 Ribosome biogenesis [BR:
rno03009
]
688288 (Eif4a3)
03012 Translation factors [BR:
rno03012
]
688288 (Eif4a3)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
688288 (Eif4a3)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
688288 (Eif4a3)
mRNA cycle factors
Stress granule specific factors
688288 (Eif4a3)
Spliceosome [BR:
rno03041
]
Complex C
Other components
EJC/TREX
688288 (Eif4a3)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
90S particles
Helicases
688288 (Eif4a3)
Translation factors [BR:
rno03012
]
Eukaryotic type
Initiation factors
eIF-4
688288 (Eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
688288
NCBI-ProteinID:
NP_001093628
RGD:
1591139
Ensembl:
ENSRNOG00000045791
UniProt:
Q3B8Q2
LinkDB
All DBs
Position
10:complement(105047567..105057561)
Genome browser
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggccacgatggcgacgtcgggctccgcgcggaagcggctgctcaaagag
gaggacatgaccaaagtggagttcgagaccagcgaggaggtggacgtgacccccacgttc
gacaccatgggccttcgggaggacctgctgcgcggcatctacgcctacggttttgaaaaa
ccttctgcgatccaacagcgtgctatcaagcagataattaaagggagagatgtcattgca
cagtctcagtctggcacaggcaagacggccaccttcagtatttcagtccttcagtgcttg
gatatccaggttcgagaaacccaagctttgatattggctccaacaagagagttagcagtg
cagattcagaagggtctgcttgctttgggggattacatgaacgtgcagtgccatgcctgc
attggtggcaccaatgtcggggaggacatccggaagctggactatgggcagcatgttgtg
gcgggcacaccaggacgagtctttgatatgatccgccgtagaagtttaaggacacgggca
atcaagatgttggttttggatgaagctgatgaaatgttgaacaaaggtttcaaggagcag
atctatgacgtgtacaggtacttgccaccagccactcaggttgttctcatcagcgccacg
ctgccccatgagatcctggagatgaccaacaagttcatgaccgaccccatccgcatcttg
gtgaagcgtgatgagttgactctggaaggcatcaaacagttcttcgtggccgtggaaaga
gaggaatggaagttcgacactctctgtgatctctacgacacgctgaccatcacccaggct
gtcatcttctgcaacaccaagaggaaggttgactggctgacagagaaaatgagagaagcc
aatttcacagtgtcgtccatgcacggagacatgccccagaaagagcgtgagtccatcatg
aaggagttccggtcaggtgccagccgagtgctcatctccacagatgtctgggcgcggggc
ctcgatgtccctcaggtgtccctcatcattaactatgacctgcccaacaacagagaactg
tacattcacagaatcgggagatcaggtcgatatggacgcaaaggtgtggccatcaatttt
gtgaagaatgatgacatccgcatcctcagggacattgagcagtactactccacccagata
gatgagatgcctatgaatgtggctgacctcatctga
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