Rattus norvegicus (rat): 688721
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Entry
688721 CDS
T01003
Symbol
Lrfn4
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4 precursor
KO
K16357
leucine-rich repeat and fibronectin type-III domain-containing protein 4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
688721 (Lrfn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
688721 (Lrfn4)
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
688721 (Lrfn4)
Cell adhesion molecules [BR:
rno04515
]
Immunoglobulin superfamily
SALM family
688721 (Lrfn4)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
688721 (Lrfn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
Ig_3
ig
fn3
Ig_2
LRR_9
LRR_14
LRR_5
LRRCT
FN3_DSCAM-DSCAML_C
Sp38
Motif
Other DBs
NCBI-GeneID:
688721
NCBI-ProteinID:
NP_001102978
RGD:
1585286
Ensembl:
ENSRNOG00000019356
UniProt:
D4ABX8
LinkDB
All DBs
Position
1:complement(211317980..211321272)
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AA seq
636 aa
AA seq
DB search
MAPPLLLLLLASGAAACPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFI
QALGPPDFRNMTGLVDLTLSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSSLRGPV
NLQHLILSGNQLGRIAPGAFDDFLDSLEDLDVSYNNLRQVPWAGIGSMPALHTLNLDHNL
IDALPPGVFAQLSQLSRLDLTSNRLATLAPDPLFSRGRDAEASPSPLVLSFSGNPLHCNC
ELLWLRRLARPDDLETCASPPTLAGRYFWAVPEGEFSCEPPLIARHTQRLWVLEGQRATL
RCRALGDPVPTMHWVGPDDRLVGNSSRAWAFPNGTLEIGVTGAGDAGAYTCIATNPAGEA
TARVELRVLALPHGGNTSAEGGRPGPSDIAASARTAAEGEGTLESEPAVQVTEVTATSGL
VSWGPGRPADPVWMFQIQYNSSEDETLIYRIVPASSQHFLLKHLVPGADYDLCLLALSPA
AGPSDLTATRLLGCAHFSTLPATPLCHALQAHVLGGTLTVAVGGVLVAALLVFTVALLVR
GRGAGNGRLPLKLSHVQSQTNGGTSPMPKSHPPRSPPPRPQRSCSLDLGDTGGCYGYARR
LGGAWARRSHSVHGGLLGAGCRGMGGSAERLEESVV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggccccgccgctcctattgctgttgctggccagtggagccgctgcttgcccgctgccc
tgtgtgtgccagaacctgtcggagtcgctcagcaccctttgtgcccaccgaggcctgctg
tttgtgccacccaacgtggacaggcgcacagttgaactgcgcctggctgacaacttcatc
caggccctgggaccacctgacttccgcaacatgacagggctggtggacctaacattgtct
cgaaatgccatcacccgcatcggggcccgctcctttggggacctggagagcctgcgctcc
ttgcacctggatggcaacaggctggtggaactgggcagcagcagcctacgggggcctgtc
aacctccagcacctcattcttagtggcaatcagctgggccgaatcgctcctggggccttc
gacgacttccttgacagtctcgaggacctggatgtgtcctataacaatctccggcaggtt
ccctgggctggcataggctccatgcctgccctgcatacccttaacctggaccataacctc
attgatgcgctgcccccaggtgtttttgcccagcttagccagctctcccgcctggacctg
acctccaaccgcctggccaccctggcacctgatccactcttctctcggggtcgggatgct
gaggcctcaccttcccctctggtgctgagtttcagcgggaacccactgcactgcaactgt
gagctgctgtggctgcggaggctggcccggcctgatgacctggaaacctgcgcttctcca
ccaaccctggcaggccgctacttctgggcagtgcctgagggagagttctcctgtgagcct
ccactgattgcccgacacacacagcgcctgtgggtgctagaaggtcagcgggccactcta
cggtgcagggctcttggtgaccctgtacctaccatgcactgggttggtcctgatgacagg
ctggttggcaactcttctcgagcctgggctttccccaacgggaccctagagattggggtg
acaggcgctggagatgcaggagcctatacctgcattgctaccaaccctgccggtgaggcc
acagcccgagtggagctccgggtactggccttgccccatggtgggaacaccagtgctgag
gggggccgtcctgggccctcggacattgctgcctctgctagaactgctgctgaaggcgag
ggaactttagaatctgaaccagccgtgcaagtgacagaggtgactgccacctctggactg
gtgagctggggcccagggcggccagctgacccagtgtggatgttccaaatccagtacaac
agcagcgaggatgagaccctcatctaccggattgtaccagcctccagccaacacttcctg
ctgaagcacctggttcctggtgctgactacgacctctgcctgctggccctgtcacctgct
gctgggccctccgacctcacggccactagactgctgggctgtgcccacttctctacccta
ccagccacccccctgtgccatgccctacaggcccatgtgctgggcgggaccctgactgtg
gcagtgggaggcgtcctagtggctgccttactggtcttcactgtggccttgctggttcgg
ggccggggagctgggaatggccgcctcccactcaaactcagccatgtccaatcccagacc
aatggtggcactagccccatgcccaagagccacccaccacggagccctccaccccgtccc
cagcgcagctgctccctggacctaggagacaccggtggatgctacgggtatgccaggcgc
ctgggaggagcctgggcccggcggagccactctgtacatggggggctgctgggagctggg
tgtcggggtatggggggcagtgcggagcggctggaggagagcgtggtgtga
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