Rattus norvegicus (rat): 689116
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Entry
689116 CDS
T01003
Symbol
Ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno03015
mRNA surveillance pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
689116 (Ncbp2)
09122 Translation
03013 Nucleocytoplasmic transport
689116 (Ncbp2)
03015 mRNA surveillance pathway
689116 (Ncbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
689116 (Ncbp2)
03041 Spliceosome [BR:
rno03041
]
689116 (Ncbp2)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
689116 (Ncbp2)
Spliceosome [BR:
rno03041
]
Common components
Common spliceosomal components
Cap binding complex
689116 (Ncbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
RRM_5
Motif
Other DBs
NCBI-GeneID:
689116
NCBI-ProteinID:
NP_001102995
RGD:
1596188
UniProt:
B1WC40
A6IRU9
LinkDB
All DBs
Position
11:complement(82326002..82334839)
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AA seq
156 aa
AA seq
DB search
MSGGLLKALRSDSYVELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELF
SKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFK
EGRQYGRGRSGGQVRDEYREDYDAGRGGYGKLAQKQ
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtggcctcctgaaggcgctgcgcagtgactcctacgtggagctcagcgaatac
cgggaccaacacttccggggtgacaatgaagaacaggaaaagttactgaagaagagctgt
acgttgtatgttgggaatctttccttttatacaacagaagaacagatttatgagctcttc
agcaaaagtggggacataaagaagatcatcatgggtctggacaagatgaagaaaacagcg
tgtgggttctgtttcgtggaatactattcaagagcagatgcagagaacgcaatgcggtac
ataaacggaacgcgtctggatgaccggatcatacggacagactgggatgcaggctttaag
gagggcaggcagtatggacgtggacggtctgggggtcaggtccgggatgagtatcgggag
gactacgatgctggaagaggcggctatggaaaactggcacaaaaacagtga
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integrated database retrieval system
