Rattus norvegicus (rat): 689349
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Entry
689349 CDS
T01003
Symbol
Catsper1
Name
(RefSeq) cation channel sperm-associated protein 1 isoform X1
KO
K16889
cation channel sperm-associated protein 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
689349 (Catsper1)
04040 Ion channels [BR:
rno04040
]
689349 (Catsper1)
Cilium and associated proteins [BR:
rno03037
]
Motile cilia and associated proteins
Sperm associated proteins
689349 (Catsper1)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
689349 (Catsper1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FAM167
Motif
Other DBs
NCBI-GeneID:
689349
NCBI-ProteinID:
XP_038957256
RGD:
1593515
Ensembl:
ENSRNOG00000056208
LinkDB
All DBs
Position
1:212072371..212081179
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AA seq
678 aa
AA seq
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MDQPSRTDESYYETHSGSLDPSHHFHPPSSYPYPHPTLYRPSLGGVLHHESPQHGVSPQP
SQQHAGFYQQNESQHLRGSDFHDSAFPHHSYHQDRAHFSTSPTNVPHTYGGPHPLAESQH
SGGPQDGSHIESYHSHQGNPRKPSVALSHPSSIGSHQGKTHHHYERPQYLDPRQSRRQSD
LSDNLSHRSGEEYQNQERSGLQVGQQQEGQRASSKRGEHRRRRGDYLKYKDRIRHRRPSA
SQLSHKSHSTEGTSPSHMRSKSLASMPQSHLGVQSYVSSQVHSGDSLKESVSWSDEDHVQ
KRKKAQRTHKKAHSGNVFHLIWEKISQLLLGLRQMLLTLTQSLCFETFIFLVVCLNTIVL
VAQTFTELEIRGEWYFMVLDSIFLSIYVIEAFLKLIALGMEYFYDPWNNLDFFIMVMAAL
DFVLLQINSLSYSFYNHSMFRILKVFKSMRALRAIRVLRRLSILTSLHEVTGTLSGSLPS
ITAILSLMFTCLFLFSVVLRALFQESDPKRFNNIFTTLFTLFTMLTLDDWSLIYIDNRAQ
GAWYIIPILVIYIIIQYFIFLNLVIAVLVDNFQMALLKGLEKVKQEQAARVHEKLLDDSL
TDLNKADPDAQMTEETLKTQLIERMFGNMTEKQRKLHFQFLQLVAAVELHQQKFRSQAFV
IDELVDTAFEAGDDDFGK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaccttcaaggacagacgagtcttactatgagacacactctggtagcttggat
ccaagccatcacttccacccaccatcctcctacccctatccccaccccacactgtatagg
ccaagcctcggtggagtccttcatcatgagtctcctcaacatggggtgtccccacaacca
tcccaacagcatgctggattctatcaacaaaatgaatcccagcatttgcgtggatcagac
ttccatgatagtgctttcccccatcattcctatcatcaggacagggcccacttctccaca
tcacctactaatgtccctcacacttatggcggacctcatccccttgctgagtctcagcac
tctggtggaccccaagatggatctcatattgaatcctatcattcccaccaaggtaacccc
cgtaaacccagtgtagctttgtcccatccctcctctattggcagccaccaagggaaaacc
catcaccactatgagaggcctcaatatcttgaccctcgccagagcagaaggcagtctgac
ctttcagacaacctttcccatcgctctggtgaggagtaccaaaaccaggaaagatctggt
ctccaagtcggtcagcaacaggagggccagcgagccagctctaaacgtggtgagcatcga
cgccggcgtggagattatttgaagtacaaagaccgtattcgccatcgccgcccaagtgct
tcccagctctcacacaagtcccacagcacagaaggcacctctccttctcatatgagatcc
aagagcttagccagtatgcctcagtctcacttgggagttcaatcttatgtttccagccaa
gttcattccggggatagcttgaaagaatcagtctcttggagcgatgaggaccatgttcag
aaacgcaaaaaggcccagaggacccacaagaaggcacactctgggaatgtcttccatttg
atatgggaaaaaataagccaactccttttgggtctccggcaaatgttattgacactaacc
cagtccctgtgctttgagacctttatcttcctcgtggtctgcctgaacacaatcgtcctt
gtggcccagactttcactgagctagagatccgaggtgaatggtacttcatggttttggac
tctattttcctgtccatctatgtgatagaagccttcctcaagctaatcgctctgggcatg
gagtatttttacgacccatggaataatctggacttcttcatcatggtcatggcagcgttg
gactttgtgctcctccagataaactcgctctcctattcattctacaaccacagcatgttc
cggatcctcaaagtcttcaagagcatgcgggccctgcgggccattcgggtccttcggagg
ctcagcatcctgaccagcctccacgaagtgaccgggactctgagtggatctctgccgtcc
atcacagctatcctctccctcatgtttacctgtctcttcctcttctctgtggtgctccgg
gcactgtttcaggagtcagaccccaagcgcttcaataacatctttaccactctcttcacc
ctattcaccatgctcaccttggatgactggtccctcatctacatagacaacagggcccaa
ggtgcctggtacatcatccccatcctcgtgatttacatcattatccagtacttcatcttc
ctcaacctggtgattgctgtcctggtagacaacttccagatggcattgctcaaaggccta
gagaaagtgaagcaggagcaagctgcccgggtccatgagaagttgctggacgactctttg
acagatctcaacaaagcagacccggatgcccaaatgactgaggagaccttgaagacgcag
cttattgagagaatgtttggcaacatgacagagaagcaacggaagctccacttccagttc
ctgcagttggtggcagctgtggagctgcatcagcagaagtttcgctcccaagcctttgtc
atcgatgagcttgtggacactgcatttgaggctggagacgacgattttgggaagtga
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