Rattus norvegicus (rat): 689639
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Entry
689639 CDS
T01003
Symbol
Tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X2
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
689639 (Tdrd12)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
689639 (Tdrd12)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Gene silencing
piRNA pathway
689639 (Tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
AAA_35
Motif
Other DBs
NCBI-GeneID:
689639
NCBI-ProteinID:
XP_017445552
RGD:
1562792
Ensembl:
ENSRNOG00000012719
UniProt:
F1LTR3
LinkDB
All DBs
Position
1:complement(97270280..97342637)
Genome browser
AA seq
1308 aa
AA seq
DB search
MLEVLVLKIEDPGCFWVIIKGCSHFLEQEVDYQKLNSAMNDFYNSMCQDIEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSIISSADHYLAECFLVDFAKYIPVKSKNIRVAVESFMQLPY
RAKKFRLYCTKPVTLHIDFCEDNAEIVPATKWDSAAIQYFQNILRATTQVEAKLCAVEED
TFEVYLYATIKNEKVCVNDDLVAKNFAYYVSPMGNKNLNTLEKPRLSLNSVPCSSKLSPS
LTLWPMLLQGKDCQRMENSQSLDFLAQSLQHTWCKDVVGDLGPRAAVLDKAVNYKDSLTD
SPTIMFEKKQQSLPLKHMDKCIESSMYWPTKRGITIYADPDIPAASVFSQKPSEKPLRLT
EKKDCDEKNGCVKLLQFLNPDPLRADEISDLHQLQKVKLGTLQPGVVLRNRIEPCLTLDK
SPLSADLKKALQRNKFPGPSHTASYSWPPIARGCDVVVISHCGNDPLLYLPPLLTILQMG
GCYKSLPSRNGPLAVIVCPGWKKAQFIFELLGDYSMSSRPLHPVLLTIGLHKDEAKNMKL
PRGCDVIVTTPHSLLRLLTYRSLLFLRLCHLVLDEVHVLFFEANEQMFAILDNFKKNVEV
EERESAPHQIVAVGVHWNRHIEHLVREFMKDPHVVITALEEAALYGSVQQVVHLCLECEK
TSTLLQVLDFVPSQAQKTLIFTCSVAETEIVCKVVESNSIFCLKMHKEMAFNLKSILEQW
KKKLSSGSHIVLTLTDDCIPLLAITDATCVVHFSFPSSPKVFGGRLYCMSDHFQSLTEQG
SPAEQGGKKTKSVLLLTERNASHAVGVLRYLERADAKIPSELYEFTAGVLEAKEDKKARR
PLCPYLKAFGFCKDKRICPDRHHINPEMDIPRKLSNETLPVFGHIRIIPFYISNATNYFG
RIIDKHVDLYETLNAEMNEYFKDPSNKTAAEKVENLGLYGLEEKTLFQRVQVLEASQKED
TWGLGSVLVKFIDEGRTKLITRDQLLLLPEKFHTLPPQAVEFIVCRVKPADSEIEWNPKV
TRYIHHKIIGKMHEAKVVFALGNTLWIDPMVHVTKLSNLKTSVIDYNVRAEILSMGMGID
NSEHVEQLKKLHKEAKLPAFVDLPSQTSIPTTVEGTMCLQGTQRGDRGTERGAGSQVDPD
NQKPGVLSEDIGHETISKATQPHVRSFHPQIKWFQKDDHIILKIKIRNVKDYKCKFFTDR
VIFSAWVGDKFYLADMELQGDIRKDDCKCIIKDDEPLITLAKEKRACWCGLLKQRNPNVA
FDFDHWEECEEDSPFSKVVSSKTLSCKAAALAESSSSSSDMTDGSESE
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtcctggtgctgaagattgaagatccaggttgcttctgggtaattataaaa
ggatgtagtcattttttagaacaagaagttgactaccaaaaactaaacagtgccatgaat
gacttctataacagcatgtgtcaagacatagaaataaagccgttaatgctagaagaaggc
caggtgtgtgtggtgtactgtcaggagctgaagtgctggtgcagggctgtgattaagtcg
atcatctcttctgcagaccattacctggcggagtgtttccttgtggattttgccaagtat
attccagtaaaatctaaaaacatccgagttgcagtagagtcttttatgcagcttccttac
agagcaaaaaaattcagactttactgtacaaaacctgtgacattgcacattgacttctgt
gaagacaatgctgaaattgtacctgccacaaaatgggacagtgcagctatccagtacttt
cagaacattctaagagcaactacccaagtggaagcaaagctatgcgctgtggaagaagat
acttttgaggtttacctttatgcaacaataaaaaatgaaaaagtttgtgttaatgatgat
ctagttgcaaagaattttgcttattatgtgtcaccaatggggaacaaaaacctcaatact
ttggagaaacccaggctgagtctcaattcggtgccctgctccagtaagctcagcccatca
cttactctgtggccaatgcttctgcaaggaaaagactgtcagagaatggaaaactcacag
agtttagattttctggcacagtctctccagcatacatggtgtaaggacgttgtcggtgac
ctaggaccacgtgctgcagtactggataaagctgtaaactataaggattccttgacagat
tcgcctacaattatgtttgagaagaagcaacagagcctccctttaaaacacatggataag
tgcattgaatcttctatgtactggccaacaaaaagaggcataaccatatatgctgatcca
gatattccagcagcaagtgtgtttagccagaagccaagtgagaagccactgcggttgact
gaaaagaaagactgtgacgagaagaatggctgtgtaaaattactacagtttctaaatcct
gatcctttgagagctgatgagatctctgacctgcaccagttgcagaaggtgaagctgggc
acattgcagcctggtgtggtgctccggaacaggatcgagccctgcctcacactggataaa
tcacctctgtcagcagacctgaagaaggctcttcaaagaaacaagtttccaggacccagc
cacactgcatcttactcttggcctcctattgcacgtggctgtgatgtggttgtcatttct
cactgtggaaatgaccccttgttgtacctgccaccgctgcttacgattttgcagatgggg
ggctgctacaagtcattaccaagtagaaatggacctcttgcagtcatcgtgtgtccaggg
tggaaaaaggctcagtttatttttgagttgttgggagactatagcatgtcctccaggcct
cttcatcctgtgttattaacaattggacttcacaaagacgaagccaaaaatatgaagctt
ccaaggggatgtgatgtgattgtcacaacgccacacagccttctgagacttctcacgtac
cgaagcttgttattccttagactctgccacctggttctggatgaagtgcacgtactgttc
ttcgaagctaacgaacaaatgtttgccatattagataactttaaaaaaaacgttgaagtg
gaggagcgggagtctgcgccacaccagattgtagccgtgggtgttcactggaacagacac
atagagcatctagtcagagagttcatgaaggatccccacgtcgtgatcactgccctggag
gaggctgccctctacggcagtgtccagcaggtagtgcatctgtgcctggagtgcgagaaa
acctcgactttactccaagttcttgactttgttccaagtcaggcccagaagaccttgatc
tttacctgctccgtagcagagacagagattgtatgtaaggtagtagaaagcaattcaata
ttttgcttgaaaatgcataaagaaatggcttttaatttaaaaagtattttggaacagtgg
aagaagaagttaagctctggctcccatattgtgttaaccttaacagatgactgcataccg
ctcttggccatcaccgatgccacatgcgtggttcacttcagctttccttcctcaccaaaa
gtatttggtggacgcctgtattgcatgtctgatcattttcagagtttaactgagcagggc
tcacctgcagagcagggaggtaagaaaacgaaatctgtcctactgctgacggagaggaat
gccagccatgccgtcggggtcctgcgatacttggagcgagcagatgccaaaattccatcg
gagctgtatgagtttactgcaggggtcctggaagccaaagaagataagaaagctagaaga
cctctctgtccatatcttaaagcttttggcttttgcaaagacaaaaggatctgtcctgac
cggcaccacattaatccagaaatggacatcccaaggaaattatccaatgaaactctacca
gtgtttgggcacattaggataatacctttttacatttcaaatgcaaccaattattttggc
cgtataattgataaacatgtggatctttatgaaactctcaatgcagaaatgaatgaatat
tttaaggatcccagtaataaaacagctgctgaaaaggtggaaaatttggggttgtatgga
ttagaagaaaaaacacttttccagagggttcaggtgttggaagcgagccagaaggaagac
acctggggtttggggagtgtcctggtgaaattcatagatgaaggcaggaccaagctcatc
acaagagaccagctgctgctgctcccagagaagtttcacactctgccccctcaggctgtg
gagttcattgtttgtagggttaaaccagctgacagtgaaattgaatggaacccaaaggtt
actagatacattcatcataaaattattgggaaaatgcatgaggccaaggtggtattcgct
ttgggaaataccctttggattgatccaatggtgcatgttacaaaactttcaaatttaaaa
acttctgtcattgattataatgttcgagctgaaattttgtccatgggaatgggtattgat
aattcagaacatgtagaacaactgaaaaaactacacaaagaagctaagctgccagccttt
gtggaccttccaagccagacttcgatacccacaacagtagaaggcaccatgtgtttgcag
ggcactcagcgaggagacagaggtacagaaagaggagctggttcccaggtggacccagac
aaccaaaagcctggagttttatctgaagacattggccatgagaccattagcaaagctaca
cagccacatgtgagaagctttcacccacaaataaagtggttccaaaaggatgaccacatc
atcttaaagataaaaataaggaatgtcaaagactataagtgtaaattctttacagataga
gtcattttcagtgcctgggtaggagacaagttttacttggctgatatggaactgcaaggt
gacataaggaaagatgactgcaaatgcataattaaggatgatgagcctctaatcacactt
gcaaaagagaaacgggcatgctggtgtggcctcctcaagcagaggaatcctaatgtggct
tttgactttgaccactgggaggagtgtgaagaggacagccctttctccaaggtcgtaagt
tctaaaaccctgtcctgcaaagcggcagcactggctgaaagcagcagctcctcttcagac
atgactgacgggagtgagagcgaatga
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integrated database retrieval system
