Rattus norvegicus (rat): 689695
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Entry
689695 CDS
T01003
Symbol
Prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
689695 (Prdm13)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
689695 (Prdm13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-BED
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
689695
NCBI-ProteinID:
NP_001178027
RGD:
1589883
Ensembl:
ENSRNOG00000007683
UniProt:
A6IID9
LinkDB
All DBs
Position
5:complement(40017607..40029658)
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AA seq
706 aa
AA seq
DB search
MHGTSRTSATSVNADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDES
GGSPLEWIGLIRAARNPQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFD
IPTTATPTHDEKGEERYICWYCWRTFRYPNSLKAHLRFHCVLSGGGGRAFLPQEHAARPG
ASPVAEGLGLPPKPTAPDLTAPVQAAALRPQAQAAQLSQACGTRESIKREASLAPLASSP
PPGKWGTPKKGKEQPDRAHSHFLGIVGGSSAGSAGLPFYPGVRSAFKPAGLARAAAQSDP
YREEGGGKGPGLGLGRLLGGGRAAGRPGSGESPAGHHHHHHHAHHHHHHHPKCLLAGEPP
PAGLPCPGALRAFPLLAGHPEEASAFKHVERAPPAAATAASLPAARYAALPAPGLPVERC
ALPPLDAGSLKAYPGGECSPLPAVMPAFTVYSGDLLYGPPATYYPLKLHLGGLLKYPESI
SYLSGPAAAAAAAAAAAAAAAAIGPTELGSLASIDREIAMHTQQLSEMAAGKGRTRLDSG
TLPPAVVAAAGPGGGGGGGGGGGAAGKAKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKPL
KCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSLIAK
AGDGSGAEPGYALEPGDPKSEDSDVDVCFTDDQSDPEAGGRGEHDS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaacttcccgcacttcggccaccagcgtgaacgctgactgctgcatcccggct
ggcttgcgccttgggccggtgcctggcaccttcaagctgggcaagtacctgtcagatcgc
agggaaccagggccgaagaaaaaggtgcgcatggtgagaggggagctggtggacgagtca
gggggctctcccctggagtggatagggttaatccgggcagccaggaatccccaggaacag
actctggaagctattgcagacctaccaggaggacagatcttctatcgggcattgcgagat
gtccagccaggcgaagagctaactgtgtggtattctaactccttggctcagtggtttgac
atccctacaactgcgactccgactcatgatgagaaaggggaggagcgctacatctgctgg
tactgctggaggacctttcgatacccgaacagcctcaaggcacacctgcgtttccactgc
gtgctcagcggcggcgggggccgcgccttcctgcctcaggagcacgcggcccggccgggc
gcttccccggtggcagaaggcctcggcctccctccgaaacccactgccccggacttgacg
gcgcccgtccaggcagccgctctgcggcctcaagcccaggccgctcagctctcccaggcg
tgcgggacgagggagagcatcaagcgggaggcttccctggcgcccctggcctcctccccg
cctcccggcaagtgggggacgccgaagaagggcaaggagcagccggaccgcgctcacagt
cacttcctggggatcgtgggcggctcctcagccggcagcgcaggcctgcccttctaccct
ggcgtgcgctccgcattcaagccggccggcctggcccgggccgctgcgcagagcgacccc
taccgggaagagggcggcggcaaggggcccgggctggggctaggccggctgctgggcggg
ggccgggcggccgggcgcccgggcagtggggagagcccggcgggccaccaccaccatcac
caccacgctcaccaccaccaccaccaccaccccaagtgcctgctggccggggagccgccg
cccgccggcctgccgtgtcctggggccctgcgggccttccccctgctcgccggccacccg
gaagaggcgtcggccttcaagcacgtggagcgggctccgcctgccgcggccacggccgcc
tcgctgcccgccgcgcgctacgccgctctcccggctcccgggctccccgtggagcgctgc
gcgctgccgcccctcgacgccggcagcctcaaggcgtaccccgggggcgagtgcagccct
cttcccgccgtcatgccggccttcacggtgtacagcggagacctgctctacggcccgccc
gccacctattaccctctcaagctgcacttgggcgggctgctcaaatacccggagtccatc
tcctatttgagcggccccgcggcggcggcggcggcagcagcggcagcggcggcggcggcg
gcggcgatcggcccgactgagctgggttccctggccagtatcgaccgcgagatcgccatg
cacacgcagcagctgtccgagatggcagccgggaagggtcgtacccgcctggactccggg
acgctgcctccagccgtagtggcggcggcaggccccgggggtggcggcggtggcggcggt
ggcgggggcgccgcaggcaaggccaagacgggccacttgtgcctctactgtggcaagctg
tactcgcgcaagtacgggctcaagatccacatgcggacgcacacgggctacaagccgctc
aagtgcaaggtgtgcctgcggcccttcggcgaccccagcaatctcaacaagcacatccga
ctccatgcggagggcaatacgccctaccgctgcgagttctgcggcaaggtgctggtgcgc
cgccgagacttggaacgtcacgtcaagtcccgccacccaggccagagcctgatcgccaag
gcgggcgacggctcgggcgcggagcccggctatgctctggagcctggggatcccaagagc
gaggacagtgatgtggatgtctgcttcactgacgaccagagcgaccctgaggctgggggc
cgtggcgagcacgactcctaa
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