Rattus norvegicus (rat): 690450
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Entry
690450 CDS
T01003
Symbol
Taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
690450 (Taf1b)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
690450 (Taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
690450
NCBI-ProteinID:
NP_001178036
RGD:
1596058
Ensembl:
ENSRNOG00000061415
UniProt:
D3ZYB7
LinkDB
All DBs
Position
6:46845571..46923209
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AA seq
586 aa
AA seq
DB search
MDVEQMKAFTDRCSQCAAVSWGLTDEGKYYCTSCHNVTDRSEEVVSTAVIPNTKINSISR
GLRQRSKHEKGWDWYVCEGFQCILYHQAEALETLGVSPELKNEVLHSFWKRYLQKSKQAY
CKNPVRTSGRKAKVLEDNLQSSDWGSDFELLSDTTCPPESGAEFQSDSQTPKPFPATKRS
SKSASVCSGSVDGVEYSERKEKGLLKMTVPRTLALCYLSLLWQRETITLSDLLRFVEEDR
IPYINAFKVFPEEMKVYGRDKGIFAVESWPDYEDIYKNMIEVAVFLDLPRFPDITEDCYL
HPNTLCMKYLLEVNLPEEMYTLTCQVVKLTGIGEVDFLTFDPIAKMTRTVKHDVQAVAVI
VLVLKLLFLLDDKLEWSYSDLAEAYNEGHKEETPQFDFRKWYQVMKKTFDEKRRKWEEAR
AKYVWKTKRPLYRSHIDKSVAYKRREMVENLQKQFSALIGSAPEVERQAPSSFQLNWTGE
DTGSPCFHGHSLQGLLISKGQALITKNSLYWLSTHKFCKSYCKHVTTYEESNFSLSYQFI
LNIFSFLLRIKTSALHEEVSLLEKKLFEKKYNESKRSSRSKKVRRH
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagcagatgaaagcattcacagaccgctgttctcagtgcgccgctgtctcc
tggggccttactgatgaaggcaaatactattgtacctcctgccacaatgtcacagatcga
tccgaggaagtcgtgagcactgcagttatccctaacaccaagatcaactccattagcagg
ggcctgagacagagaagcaagcatgagaaaggctgggattggtacgtgtgtgaaggcttc
cagtgcatactttatcaccaagcagaagccctggagaccctcggagtaagcccagaacta
aagaatgaagtcttgcacagtttttggaagcgctaccttcagaagagcaagcaggcctat
tgtaaaaacccagttcgcacaagtggaaggaaagccaaggtattagaagacaatctgcag
tcctctgactggggcagtgattttgagttgctcagtgacaccacatgtcctcctgaaagt
ggagcagagttccagtctgactcccagactccaaagcctttccctgccaccaaacgatca
tcaaagtcagcatccgtctgttctggatctgttgatggagtggagtactcagagcggaag
gagaaggggctcctgaagatgactgtgcccaggacacttgccctctgctatctgtccttg
ctctggcagagagaaacaattacactttcagaccttttgaggtttgttgaagaggaccgt
attccatacataaatgcttttaaggtttttccagaggagatgaaagtatatggtcgtgac
aaaggcatctttgctgtcgagtcttggcctgactatgaagacatctataaaaacatgatt
gaagtcgccgtgtttttagatttgcctcgtttcccagacataactgaagactgctacctc
catcccaacaccttgtgtatgaaatacttactggaggtcaatctccctgaggaaatgtac
actttaacctgccaagtagtaaagctgactggaattggagaagtagattttctgacgttt
gaccctatagctaaaatgacaaggacagtcaaacatgatgtgcaggctgtggctgtcatc
gtgcttgtgttgaagctgctgtttctgctggatgacaagctggaatggtcttactcagat
cttgctgaagcatataacgaaggacacaaagaagaaactccgcagtttgatttcagaaaa
tggtaccaagttatgaagaaaacttttgatgagaaaagacgaaaatgggaagaagcaagg
gccaagtatgtttggaaaaccaaaaggccactctaccgttcacacattgataagtcagtc
gcatataagagaagagaaatggtggagaatcttcagaaacagtttagtgccctgattggt
tcagcacccgaggtggaaaggcaggccccttcaagttttcagctcaactggactggagaa
gacaccggtagcccttgtttccatggacacagcctccaggggctcctgatatcgaaaggc
caggccttgataaccaagaactccctgtactggctcagtacccacaagttctgtaaaagc
tattgtaaacatgtgacaacttacgaagaatcaaatttttctttgagttaccagtttata
ctaaacattttctccttcttactgagaataaagacctctgctctccatgaagaagtgagc
ctacttgaaaagaaactttttgaaaaaaagtacaatgaatcaaaaaggagctcaagatcc
aagaaagtgagaagacattga
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