Rattus norvegicus (rat): 690585
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Entry
690585 CDS
T01003
Symbol
Alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno03015
mRNA surveillance pathway
rno03040
Spliceosome
rno05014
Amyotrophic lateral sclerosis
rno05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
690585 (Alyref)
09122 Translation
03013 Nucleocytoplasmic transport
690585 (Alyref)
03015 mRNA surveillance pathway
690585 (Alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
690585 (Alyref)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
690585 (Alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
690585 (Alyref)
03041 Spliceosome [BR:
rno03041
]
690585 (Alyref)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
690585 (Alyref)
TREX complex
690585 (Alyref)
Spliceosome [BR:
rno03041
]
Complex C
Other components
EJC/TREX
690585 (Alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
690585 (Alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
690585
NCBI-ProteinID:
NP_001381323
RGD:
1594679
Ensembl:
ENSRNOG00000036687
UniProt:
M0RBB1
A6HLF7
LinkDB
All DBs
Position
10:complement(106369750..106373395)
Genome browser
AA seq
256 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQAAARVNRGGGPMRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSINRGGMTRNRGSGSFGGGGTRRGTRGGSRGRGRGTGRNSKQQLSAE
ELDAQLDAYNARMDTS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaatggacatgtctttggacgacatcattaagctgaaccggagccagcga
ggaggccgcggcgggggccggggtcgcggcagggccggctcccagggcggccgcggcggc
gcagtgcaggccgccgcgcgggtgaatcgaggcggcgggcctatgaggaaccggcccgcc
atcgcccgcggcgccgcaggcggcggcggcaggaaccgaccggcaccatacagcagaccg
aaacaacttcccgacaagtggcagcacgacctattcgacagcggcttcgggggtggagcc
ggcgtggagacgggtgggaagctgcttgtgtcaaacctggatttcggagtgtcagacgct
gatattcaggaactgtttgccgagtttggaacgttgaaaaaagctgctgtgcactatgat
cgctctggacgaagtttagggacagcagatgtacactttgaacggaaagcagatgccctg
aaggctatgaaacagtacaatggtgtccctttggatggccgccctatgaacatccagctt
gtcacatcacagattgatacacaacgaagacctgcacagagcataaacagaggtggcatg
acaagaaaccgtggttctggcagttttggtggtggcggcaccaggagaggcactcgtgga
ggcagccggggaagaggtagaggtaccggcaggaactcaaagcagcagctttctgcagag
gagttggacgcacagctggatgcttacaatgcaaggatggacaccagctaa
DBGET
integrated database retrieval system