Rattus norvegicus (rat): 691231 Help Entry 691231            CDS       T01003                                  Symbol Gemin5 Name (RefSeq) gem-associated protein 5   KO K13133   gem associated protein 5 Organism rno  Rattus norvegicus (rat) Brite KEGG Orthology (KO) [BR:rno00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rno03019]     691231 (Gemin5)    03041 Spliceosome [BR:rno03041]     691231 (Gemin5) Messenger RNA biogenesis [BR:rno03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      691231 (Gemin5)    mRNA cycle factors     P-body specific factors      691231 (Gemin5) Spliceosome [BR:rno03041]  Other splicing related proteins   Proteins involved in snRNP biogenesis    SMN complex factors     691231 (Gemin5) SSDB OrthologParalogGFIT Motif Pfam:  GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_RIG_2nd Beta-prop_WDR5 Beta-prop_EML_2 WD40 WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR19_1st EIF3I WD40_Gbeta WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd PAC11 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_TEP1_C ASA1 WD40_RFWD3 Beta-prop_WDR41 WD40_MABP1-WDR62_1st MIOS_WD40 Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_ACSF4 DNAI3_WD Beta-prop_LRRK2 Beta-prop_WDR11_2nd CFAP251_N TPR_IF140-IFT172 Beta-prop_IFT122_2nd Motif Other DBs NCBI-GeneID:  691231 NCBI-ProteinID:  NP_001165560 RGD:  1586275 Ensembl:  ENSRNOG00000002645 LinkDB All DBs Position 10:complement(42797975..42843356) Genome browser AA seq 1497 aa AA seqDB search MKPEPRTLPPSPNWYCARCSDAAPGGIFGFAARTSVFLVRVGPGAGASPGAPPFRVVGEL VGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDVETKAVVTEHALHQHTISALHWSPT VKDLIVSGDEKGVVFCYWLNRSDSQHLFTEPRAIFCLTCSPHHENLVAIGYKDGIVIIID ISKKGEVVHRLRGHDDEIHSIAWCPLSGEDCLSINQEENSEEPDIPNGKLIAETPITKGC YLATGSKDQTIRIWSCSRGRGVMVLKLPFLKRRSGGVDPTVKERLWLTLHWPKNQPTQLV SSCFGGELLLWDLTQSWRRKYTLFSTSAEGHNHSRIVFNLCPLKTEDGKQLLLSTSMDRD VKCWDMATLECCWTLPSLGGFAYSLAFSPVDVGSLAIGVGDGMIRVWNTLSIKNNYDVKN FWQGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYDTCSNKPPQISSTYHKKTVYRLAWGP PVPPMSLGGEGDRPSLTLYSCGGEGIVLQHNPWKLSGEAFDINKLMRDTNSIRYKLPVHT EISWKGDGKVMALGNEDGSIEIFQVPNLKLLCTIQQHHKLVNAIVWHHEHGSRPELSCLL ASGSNNAVIYVHNLKAVLESNPESPITITEPYRTLSGHTAKVTSLAWSPHHDGRLVSACY DGTAQVWDALREEPLFNFRGHRGRLLCVAWSPVDPECIYSGADDFCVYRWLTSMQDHSRP PQGKKCIELEKKRLSQFKPKLKKKKKPTLRLPIKQDSSIGNEDESVRENLAPVENGLSDQ DGEEEAQEPELPPSPVVCGEPVSCTAVSLGLEKSKVTVTSKVASLKKEPPKEKPEALLKK RKARSMLPLSTSLDHRSKEELHRDCLVLATATHARAELHEDVSADLEERFHLGLFTDRAA LYRMMETEGKGHLESGHPELFHQLMLWKGDLKGVLQAAAERGELTDSLVAVAPVAGYSVW LWAVEAFAKQLCFQDQYVKAASYLLSIHRVYEAVELLRSNHLYREAIAVAKARLRPEDPV LKDLYLSWGSILERDGHYAIAAKCYLGATSAYDAAKVLARKGDAASLRTAAELAAIAGES ELAASLALRCAQELLLLKNWVGAQEALGLHESLQGQRLVFCLLELLCRHLEEKQPPEVRG PSSIYHQWATGSEGTLVQRVTGVWRSAFSVDTPEQCRAALQKLQDVKYPSATSNTPFRQL LLHVCHDLTLAMLSQQAASWEEAVPALLQAVVRSYTSGNFTLMQEIYSAFLPGGCDHLRD KLGDLSPTMAAFKSLEAFFIYGQLYEVWWSLCGPGSESSIWVWSAESTVSDKQSKPGDSA SAEDMEQPLGPGLRLSAESERLLSACKELFSERHASLQTSQRTVAEVQETLAEMIRQHQK SQLCKATANGPNRDEPSQQAERAPSQPPSPTEERNAPVSLPELTRRLTEANERIAEFPES VKAWPFPDVLECCLVLLHIGSQCPGAVNPEMQQQAQKLLQKYGHTRAYRRHCQIRHT NT seq 4494 nt NT seq  +upstreamnt  +downstreamnt atgaaaccagagccgcggacgcttccgccgtcccccaactggtactgcgcgcgctgcagc gacgcggcgcccggaggcatctttggcttcgctgcgcggacctccgtcttcctcgtccgc gtgggcccgggcgccggcgcgagcccaggggcgcccccgtttcgagttgtaggagagttg gtgggacacactgaaagagtatctggtttcactttttctcatcaccctggacaatacaac ctctgtgccaccagctcagatgatgggactgtgaagatttgggatgtagagaccaaggct gtagtgacagaacacgcgctccatcagcatacaatatcagcactgcattggtctccgaca gttaaggacttaatagtctctggggatgaaaaaggagttgttttctgttactggcttaac agaagtgacagccagcacctcttcacagagcccagggccatattctgtctgacctgttca cctcatcacgaaaatctagtagccattggctacaaagacggcatagtgattatcattgac atcagtaaaaagggagaagttgttcacaggcttcgagggcacgacgatgaaatccactcc atagcctggtgtcctttgtctggtgaagactgcttatctataaaccaagaggaaaactca gaagaacctgacattcccaatgggaagcttatagcagaaacccccatcacaaaaggctgc tacttagctacaggaagcaaggatcagaccattcgaatctggagctgttcccgaggccgg ggtgtaatggttttgaaattgccctttctgaagagaagaagtgggggtgtggacccaaca gttaaagaacgtctttggttgacacttcattggcccaagaaccaaccaacacagctggta tccagttgttttggaggtgagctgctgctgtgggacctcacccagtcatggagacggaag tacacgctcttcagcacctcagcggaagggcacaatcactccagaattgtcttcaacttg tgtcctttgaagactgaggatggcaaacagctgctattgtccacgtccatggacagagat gtaaaatgttgggacatggccaccctggagtgttgctggacattaccttctcttggaggt tttgcctacagcctggccttttcacctgtggacgtgggctccctggccataggtgttggg gacggcatgatccgggtatggaatacactctccataaagaacaactacgatgtgaaaaac ttctggcaaggagtcaagtccaaggtcacggcgctatgctggcatccaaacaaggagggc tgcttagcctttgggaccgatgacggaaaagtgggattgtatgacacctgctccaacaaa cctccacagatttcaagcacatatcataagaagaccgtatataggttggcttgggggcca ccagtgccccccatgtcacttggaggggaaggagacaggccttccctcaccttgtacagc tgtggaggggaaggcattgtgctgcagcataatccctggaagctcagtggagaggccttt gacatcaacaaactcatgagagacaccaactccattagatacaagctgcctgtgcacaca gagatcagctggaaaggagatggcaaagtcatggctcttggaaatgaagatggatcaata gaaatattccaagtcccaaacttgaaactgctctgcaccatccagcagcaccacaagctt gtgaacgccatagtctggcaccatgagcatggcagccgtccagagctgagctgcctcctt gcttctggctccaacaatgcagttatctacgtgcacaacctgaaagctgtcctagagagc aatcctgagtctccaataaccatcacagagccctaccggaccctctcagggcacacagcc aaggttaccagtctggcatggagcccacatcatgatggaaggctggtatctgcttgctac gatggcacagctcaggtgtgggatgccctccgagaagaacctttgttcaatttccgagga catcgaggccggctgttatgtgttgcgtggtccccagtggatccagaatgcatctactca ggtgcagatgacttctgtgtctacaggtggctgacctccatgcaggaccattcccggcct cctcaagggaaaaaatgtattgaattagagaaaaaacggctctctcaatttaagccaaag ctaaaaaagaagaaaaaacctaccttgcgactgcccataaagcaagattcatccattggc aatgaagatgagagtgtgagggagaacttggcacctgttgagaatggcttgtccgatcag gatggtgaggaggaagcccaggagccggagctgcctccctctcccgtggtttgtggagaa cctgtttcctgcactgctgtctccttaggcttggaaaagtcaaaagtcactgttactagt aaagtcgcctcactgaaaaaggagccacctaaagagaagccagaagccttgctcaagaag aggaaggctcgctccatgctccccctgagcaccagcttagaccacaggtccaaagaggag ctccatcgagactgtttggttctagcaacggcaacacacgccagagcagaactgcatgaa gatgtgtctgccgaccttgaggaacgatttcacttgggccttttcacagacagggctgct ctgtacaggatgatggagacagaggggaaaggtcacttggaaagtggccaccccgagctt tttcaccagctcatgctctggaagggagatctgaaaggcgttctccaggctgcagcagag agaggcgagctcacagacagtctcgtggccgtggcaccagtagctggctacagtgtgtgg ctgtgggctgtggaagcctttgccaagcagctgtgtttccaggatcagtatgtcaaggct gcctcctacctgctatccatccacagagtgtacgaagctgtggagcttctcaggtcaaac catctctacagagaagctattgcagttgccaaggctcggctgcgccctgaggaccctgtt ctgaaggacctgtacctcagctgggggtccatcctggagagagatggccactatgcaatt gcagccaagtgctacttaggagccacttccgcctatgatgcagccaaagtcctagccaga aagggagatgcagcctctcttagaacagctgcagagctggctgccatagcaggagagagt gagctggctgcttccctggctcttaggtgcgcccaagagctgcttctgctgaagaactgg gtgggtgcacaggaagccttgggactgcatgaaagcctgcagggccagagactggtgttc tgcctccttgagcttctatgccggcacctggaggaaaaacagcctccagaggtcagaggc ccctcttccatttaccaccagtgggccactggttctgagggaaccttggtgcagagagta actggtgtgtggcgcagcgccttcagtgtggacaccccggagcagtgtcgggccgccttg cagaagctacaggatgtcaagtacccatcagcaacaagtaacactcccttcagacagctg ctgcttcatgtctgccatgacctaaccttagcaatgctgagccagcaggctgcttcctgg gaggaggctgtccctgcactgctgcaggctgtggttcggagctacacctcagggaatttc accctcatgcaagaaatctactcagcctttctcccaggcggctgtgaccacctacgagac aaactaggtgacctatctcctaccatggcggctttcaaaagcttagaggcctttttcatt tatgggcaactgtatgaagtctggtggtcactctgtgggcctggctcagaatcaagcatc tgggtgtggtcggctgaaagcacagtctctgataaacagagcaagccaggggacagtgcc agtgctgaagacatggagcagcctctaggcccaggcctgaggctcagtgcggagagtgaa cgtttgctgagtgcctgcaaggagctcttctcagagaggcatgccagcctacagacctcc cagaggactgttgctgaagtccaagagacgctggcagagatgatccgccagcaccaaaag agtcagctctgcaaggccacagccaacggccccaacagagatgaacccagccagcaagca gagcgggccccttcccaacctccgagcccaacagaagaaagaaatgcaccggtgtctctc cctgaattaaccagaaggctcacagaggcaaacgagagaatagctgagtttccagagagt gtaaaggcctggccctttccagatgtgctggagtgctgtctcgtcttacttcacatcggg tcccagtgtcctggtgctgtgaaccctgagatgcagcaacaggcccagaagctccttcag aagtatggccacactagagcttacagaagacactgccagattcgacacacatga

DBGET integrated database retrieval system