Rattus norvegicus (rat): 78968
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Entry
78968 CDS
T01003
Symbol
Srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform 1 precursor
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04152
AMPK signaling pathway
rno04910
Insulin signaling pathway
rno04931
Insulin resistance
rno04932
Non-alcoholic fatty liver disease
rno04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
78968 (Srebf1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
78968 (Srebf1)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
78968 (Srebf1)
04932 Non-alcoholic fatty liver disease
78968 (Srebf1)
04931 Insulin resistance
78968 (Srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
78968 (Srebf1)
04131 Membrane trafficking [BR:
rno04131
]
78968 (Srebf1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
78968 (Srebf1)
Membrane trafficking [BR:
rno04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
78968 (Srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
78968 (Srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
78968
NCBI-ProteinID:
NP_001263636
RGD:
69423
Ensembl:
ENSRNOG00000003463
UniProt:
P56720
A6HF27
LinkDB
All DBs
Position
10:complement(45507152..45529164)
Genome browser
AA seq
1134 aa
AA seq
DB search
MDELPFGEAALEQALAEVCEMDAALLTDIEDMLQLINNQDSDFPGLFDAPYAGGETGDTG
PSSPGASSPESFSSPASLGSSLEAFLGGPKVTPAPLSPPPSAPTAVKMYPSVPPFSPGPG
IKEEPVPLTILQPPAPQPSPGTLLPPSFPPPPVQLSPAPVLGYSSLPSGFSGTLPGNTQQ
TPSSLPLGSTPGISPTPLHTQVQSSAAQQPPPASAAPRMSTVASQIQQVPVVLQPHFIKA
DSLLLTAVKTDTGATMKTAGINTLAPGTAVQAGPLQTLVSGGTILATVPLVVDTDKLPIH
RLAAGGKALGSAQSRGEKRTAHNAIEKRYRSSINDKIVELKDLVVGTEAKLNKSAVLRKA
IDYIRFLQHSNQKLKQENLTLRSAHKSKSLKDLVSACGSGGGTDVSMEGMKPEVVETLTP
PPSDAGSPSQSSPLSLGSRGSSSGGSDSEPDSPAFEDNQVKAQRLPSHSRGMLDRSRLAL
CVLVFLCLTCNPLASLFGWGILTPSDASGVHRSSGRSMLEAESRDGSNWTQWLLPPLVWL
ANGLLVLACLALLFVYGEPVTRPHSGPAVHFWRHRKQADLDLARGDFAQAAQQLWLALQA
LGRPLPTSNLDLACSLLWNLVRHLLQRLWVGRWLAGQAGGLQRDYRLRKDARASARDAAV
VYHKLHQLHAMGKYTGGHLVASNLALSALNLAECAGDAISMATLAEIYVAAALRVKTSLP
RALHFLTRFFLSSARQACLAQSGAVPLAMQWLCHPVGHRFFVDGDWAVHGAPQESLYSVA
GNPVDPLAQVTRLFCEHLLERALNCIAQPSPGAADGDREFSDALGYLQLLNSCSDAVGAP
ACSFSVSSSMATTTGTDPVAKWWASLTAVVIHWLRRDEEAAERLYPLVEHIPQVLQETER
PLPRAALYSFKAARALLDHRKVESSPASLAICEKASGYLRDSLASTSTASSIDKAMQLLL
CDLLLVARTSLWRRQQSAASAQGAHGTSNGPQASALELRGFQHDLSSLRRLAQSFRPAMR
RVFLHEATARLMAGASPARTHQLLDRSLRRRAGSSGKGGAAAELEPRPTWREHTEALLLA
SCYLPPAFLSAPGQRVSMLAEAARTVEKLGDHRLLLDCQQMLLRLGGGTTVTSS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctacccttcggtgaggcggctctggaacaggcactggccgaggtgtgcgaa
atggacgcggcgctcttgaccgacatcgaagacatgcttcagctcatcaacaaccaagac
agtgacttccctggcctatttgatgccccctatgctgggggtgagacaggagacacaggc
cccagcagccctggtgccagctctcctgagagcttctcttctcctgcttctctgggctcc
tctctggaagccttcctgggaggacccaaggtgacacctgcacccttgtcccctccacca
tcggcacccactgctgtaaagatgtacccgtccgtgccccccttctcccctgggcctgga
atcaaagaggagccagtgccactcaccatcctgcagcccccagcaccacagccatcgcca
gggaccctgttgcctccgagcttccctcctccacctgtgcagctcagccctgctcctgtg
ctggggtactcaagcctgccttccggcttctcaggaacccttcctgggaacacccagcag
acgccatctagcctgccactgggctccacgccaggaatctcgcccacccccttacacacc
caggtccagagctcggccgcccagcagccgccgccagcctcagcagcccctagaatgagc
actgtggcctcacagatccagcaggtccccgttgtactgcagccacacttcatcaaggca
gactcgctgctgctgacagctgtaaagacagacacaggagccacaatgaagaccgcaggc
atcaacaccctggctcctggcacagccgtgcaggcaggccccttgcagaccctggtgagt
ggagggaccatcctggccacagtaccactggttgtggacacagacaaactgcccatccac
cgactagcagctggtggcaaggccctgggctcagctcagagccgtggtgagaagcgcaca
gcccacaatgccattgagaagcgctaccgttcctctatcaatgacaagattgtggagctc
aaggacctggtggtgggcactgaggcaaagctgaataaatctgctgtcttgcgcaaggcc
atcgactacatccgcttcttacagcacagcaaccagaaactcaagcaggagaacctgacc
ctgcgaagtgctcacaaaagcaaatcactgaaagacctggtgtcagcttgtggcagtgga
ggaggcacagatgtgtctatggagggcatgaaacctgaagtggtagaaacgctgacccct
ccaccctcagacgccggctcaccctcccagagtagccccttgtccttgggcagcagaggc
agcagcagtggtggcagtgactctgagcccgacagcccagcctttgaggataaccaggtg
aaagcccagcggctgccttcacatagccgaggcatgctggaccgctcccgcctggccctg
tgtgtactggtcttcctgtgtctgacctgcaacccattggcctcactgtttggctggggc
atcctcactccctctgatgcttcgggtgtgcaccgtagttctgggcgcagcatgctggag
gccgagagcagagatggctctaattggacccagtggttgctgccacccctagtctggctg
gccaatggactactagtgttggcctgcttggctcttctctttgtctacggggaacctgtg
accaggccacactccggcccggctgtacacttctggagacatcgcaaacaagctgacctg
gatttggcccggggagattttgcccaggccgctcaacagctgtggctggccttgcaagcc
ctgggccggcccctgcccacctcaaacctggatctggcctgcagcctgctttggaacctc
gtccgccacctgctgcagcgtctttgggtgggccgctggctggcaggccaggctgggggc
ctgcagagggactacaggctgagaaaggatgctcgtgccagtgcccgagatgcggctgtc
gtctaccataagctgcaccagctgcatgccatgggcaagtacacaggaggccatcttgtt
gcttctaacctggcactgagtgcccttaacctggctgagtgtgcaggagatgctatatcc
atggcaacactggcagagatctacgtggcagctgccctaagggtcaaaaccagcctcccc
agagccttgcacttcttgacacgtttcttcctgagtagtgcccgccaggcctgcctggca
cagagtggtgcagtgcctcttgccatgcagtggctctgccaccctgtaggtcaccgtttc
ttcgtggatggggactgggctgtacacggtgccccccaggagagtctgtacagcgtggct
gggaacccagtggatccactggcccaggtgacccgactattctgtgaacatctcctggag
cgagcattgaactgtatcgctcagcccagcccaggggcagctgatggagacagggagttc
tcagatgctcttggatatctacagttgctaaatagctgttctgacgctgtcggagctcct
gcgtgcagcttctctgtcagttccagcatggctaccaccactggcacagacccagtggcc
aagtggtgggcctcactgacagccgtggtgatccactggctgaggcgggatgaggaggca
gctgaacgcttatacccactggtagagcacattccccaagtgctgcaggaaactgagaga
ccccttcccagggcagctctgtactccttcaaggctgcccgggctctgctggaccacaga
aaggtggaatccagcccagccagcctggccatctgtgagaaggccagtgggtacctgcgg
gacagcttagcctctacatcaactgccagttccattgacaaggccatgcagctgctcctg
tgtgatctacttcttgtggcccgcaccagcctatggcggcgccaacagtcagcagcttca
gcccagggagctcacggtaccagcaatggaccccaggcctctgctctggagctgcgtggt
ttccaacatgacctgagcagcctgaggcgcttggcacagagcttccggcctgctatgagg
agggtcttcctacatgaggccacagctcggctgatggcaggagcaagtcctgcccggaca
caccagctcctggaccgcagtctgcggaggcgggcaggttccagtggcaaaggaggcgct
gcagctgagctggagcctcgacccacatggcgggagcacacagaggccttgctgttggcc
tcctgctatctgccccctgccttcctgtcggcccccgggcagcgagtgagcatgctggct
gaggcagcgcgcaccgtggagaagcttggcgatcaccggctcctgcttgactgccagcag
atgctcctgcgcctgggtggcgggaccactgtcacttccagctag
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