Rattus norvegicus (rat): 81710
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Entry
81710 CDS
T01003
Symbol
Msx1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
81710 (Msx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
81710 (Msx1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
81710 (Msx1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
81710
NCBI-ProteinID:
NP_112321
RGD:
620929
UniProt:
A6IJV7
Q9QUG0
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All DBs
Position
14:77185802..77189735
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AA seq
303 aa
AA seq
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MAPAAAMTSLPLGVKVEDSAFAKPAGGGAGQAPGAAAATATAMGTDEEGAKPKVPASLLP
FSVEALMADHRKPGAKESVLVASEGAQAAGGSVQHLGTRPGSLGAPDAPSSPGPLGHFSV
GGLLKLPEDALVKAESPEKLDRTPWMQSPRFSPPPARRLSPPACTLRKHKTNRKPRTPFT
TAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKM
AAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYSASGPFQRAALPVAPVGLYTAHVGYSMY
HLT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccccggctgctgctatgacttctttgccactcggtgtcaaagtggaggactccgcc
ttcgccaagcctgctgggggaggcgctggccaggcccccggggctgctgcggccactgca
accgccatgggcacagatgaggagggggccaagcccaaagtgcccgcttcactcctgccc
ttcagcgtggaggccctcatggccgatcacaggaagcccggggcaaaggagagcgtcctg
gtggcttccgaaggggctcaggcggcgggtggctcggtgcagcacttgggcacccggccc
gggtctctgggcgccccggacgcgccctcctcgccggggcctctcggccatttctctgtt
gggggactcctcaagctgccagaagatgctctggtgaaggccgagagcccggagaagcta
gatcggaccccgtggatgcagagtccccgcttctccccgcccccagccaggcggctgagt
cccccggcctgcaccctacgcaagcacaagaccaaccgcaagcccaggacgcccttcacc
acggctcagctactggctctggagcgcaagttccgccagaagcagtacctgtctattgcc
gagcgcgccgagttctccagctcgctcagccttaccgagacccaggtgaagatctggttc
cagaaccgccgtgctaaggccaagagactgcaggaggccgagttggagaagttgaagatg
gccgcgaagccaatgttgccgcctgcggccttcggcctctcctttcctcttggtggccct
gcagcggtggctgcagctgccggcgcctcactctacagtgcctctggccctttccagcgc
gccgcgctgcctgtagcgccggtgggactctacaccgcccacgtaggctacagcatgtac
cacctgacatag
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