Rattus norvegicus (rat): 81721
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Entry
81721 CDS
T01003
Symbol
Chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6 precursor
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04080
Neuroactive ligand-receptor interaction
rno04082
Neuroactive ligand signaling
rno04725
Cholinergic synapse
rno05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
81721 (Chrna6)
04082 Neuroactive ligand signaling
81721 (Chrna6)
09150 Organismal Systems
09156 Nervous system
04725 Cholinergic synapse
81721 (Chrna6)
09160 Human Diseases
09165 Substance dependence
05033 Nicotine addiction
81721 (Chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
81721 (Chrna6)
Ion channels [BR:
rno04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
81721 (Chrna6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
LRR_R13L1-DRL21
DUF6057
Motif
Other DBs
NCBI-GeneID:
81721
NCBI-ProteinID:
NP_476532
RGD:
69281
Ensembl:
ENSRNOG00000012283
UniProt:
P43143
G3V7L7
A6IVW8
LinkDB
All DBs
Position
16:71400615..71407315
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AA seq
493 aa
AA seq
DB search
MLNCWGRGDLRSGLCLWICGFLAFFKGSRGCVSEEQLFHTLFAHYNRFIRPVENVSDPVT
VHFELAITQLANVDEVNQIMETNLWLRHVWKDYRLCWDPTEYDGIETLRVPADNIWKPDI
VLYNNAVGDFQVEGKTKALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWT
YDKAEIDLLIIGSKVDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLP
MFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVI
PLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPATHTMPKWVKTMFLQVFPSILMMRRPLD
KTKEADGVKDPKTHTKRPAKVKFTHRKEPKLLKECRHCHKSSEIAPGKRLSQQPAQWVAE
NSEHPPDVEDVIDSVQFITENMKSHNETKEVEDDWKYMAMVVDRVFLWVFIIVCVFGTVG
LFLQPLLGNTGAS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgctgaactgctggggtcggggagaccttcgctccggtttgtgtctgtggatatgtgga
ttcttggctttctttaaaggcagtagaggctgtgtgtctgaggaacagctcttccacaca
ctcttcgcccactacaaccgcttcatccggccagtggaaaacgtttctgatcccgtcacg
gtgcactttgagttggccatcacgcagctggccaatgtggatgaagtcaaccagattatg
gagaccaatctgtggctgcgtcacgtctggaaggactacagattgtgttgggatccaacg
gagtacgatggcatcgagacgcttcgtgttccagcagataacatctggaagcctgacatc
gttctgtataataatgccgtcggcgacttccaggtcgaaggcaagaccaaagctcttctt
aagtacgatggggtgataacctggaccccgccagccatctttaagagttcctgtccaatg
gacatcaccttcttcccatttgatcatcaaaactgctccctgaaatttgggtcctggact
tacgacaaggctgaaatcgaccttctcatcattggctctaaagtggacatgaacgacttt
tgggaaaacagtgagtgggaaattgtcgatgcctctggctacaagcatgacatcaagtac
aactgctgtgaagagatttacacagatatcacctactcgttctacatcaggagactgccc
atgttttataccatcaatctcatcatcccctgcctcttcatttcctttctcaccgtgctg
gtcttttaccttccttccgactgtggcgagaaagtgactctttgcatctcggttctgctt
tctctaactgtctttttgctggtgattacagagaccatcccatccacgtctctcgtgatc
ccactagtgggtgagtatctactgttcaccatgatctttgtcacgctgtccattgtggtg
accgtgtttgtgttgaacatacactacaggaccccagcaacgcataccatgcccaagtgg
gtgaagaccatgttccttcaggtcttcccctcgattctgatgatgaggagacctctggac
aagacaaaggaagcagatggtgttaaggaccccaaaacccacaccaagaggccggccaag
gtcaagtttactcatcgaaaagaacccaagcttctaaaggaatgccgccactgccataag
tcaagtgagatagcgcctggcaagaggttaagccagcagcctgcacagtgggtggcagag
aattcagagcacccacctgatgttgaagacgtgatcgatagtgttcaattcataacagaa
aacatgaaaagccacaatgaaacaaaggaggtagaagatgactggaaatacatggccatg
gtggtggacagagtcttcctctgggtgtttataatcgtctgtgtgtttggaactgtgggg
ctctttctacagccactgcttgggaacacaggagcgtcttaa
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