Rattus norvegicus (rat): 81738
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Entry
81738 CDS
T01003
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 proprotein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno05014
Amyotrophic lateral sclerosis
rno05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
81738 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
81738 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
81738 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
81738 (Nup98)
03036 Chromosome and associated proteins [BR:
rno03036
]
81738 (Nup98)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
81738 (Nup98)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
81738 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
81738
NCBI-ProteinID:
NP_112336
RGD:
71033
Ensembl:
ENSRNOG00000020347
UniProt:
P49793
LinkDB
All DBs
Position
1:complement(165906405..166003366)
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTSNSLFGTANTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGNTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSAFSYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTPNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNNSGSSIF
GSKPAAGTLGTGLGTGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTSTAILGFG
APQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNHDSEDLASPSEYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYT
NPIAKPIPQTPESAGNKNNSSSNVEDTFIALNMRAALRNGLEGSSEETSFHDESLQDDRD
EIENSAFQIHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYVDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPPKTT
SKKLKTAPLPPAGQATTFQMTLNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVPD
SVLEESVPEDQEPVSASTQIASSLGINPHVLQIMKASLLVDEEDVDAMEQRFGHFPSRGD
TAQEICSPRLPISASHSSKSRSIVGGLLQSKFASGTFLSPSASVQECRTPRTSSLMNVPS
TSPWSVPLPLATVFTVPSPAPEVPLKTVGIRRQPGLVPLEKSITYGKGKLLMDMALFMGR
SFRVGWGPNWTLANSGEQLHGSHELENHQVAESMEYGFLPNPVAVKSLSESPFKVHLEKL
GLRQRKLDEDLQLYQTPLELKLKHSTVHVDELCPLIVPNPGVSVIHGYADWVKKSPRDLL
ELPIVKHWSLTWTLCEALWGHLKELDSQLDEPSEYIQTLERRRAFSRWLSHTAAPQIEEE
VSLTRRDSPIEAVFSYLTGSRISEACCLAQQSGDHRLALLLSQLVGSQSVRELLTMQLAD
WHQLQADSFIHDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRTLAIHLWYLLPPTAS
ISRALSMYEEAFQNTCEGDKYACPPLPSYLEGSGCVVEEEKDPQRPLQDVCFHLLKLYSD
RHYGLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGL
WEWAIFVFLHIDNSGMREKAVRELLTRHCQLSETPESWAKETFLTQKLCVPAEWIHEAKA
VRAHMESNKHLEALYLFKAGHWNRCHKLVVRHLASDAIINENYDYLKGFLEDLAPPERSS
LIQDWETSGLVYLDYIRVIEMLHRIQQVDCSGYELEHLHTKVTSLCNRIEQIPCYNAKDR
LAQSDMAKRVANLLRVVLSLQHTPDATSNSTPDPQRVPLRLLAPHIGRLPMPEDYALEEL
RGLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaaccccctttgggggtggtacagggggctttggtacaacg
tcaacatttggacaaaatactggctttggtactactagtggaggagcatttggaacatct
gcatttggttctagcaataatactggaggcttatttggtaattcacagaccaaaccagga
ggactgtttggtaccagttcatttagccagccagcaacctccacaagcactggttttggg
tttggcacatcaacaggaacatcaaatagtttgtttggaactgcaaatacagggaccagt
cttttctcatcccagaacaatgcatttgcacaaaataaaccaactggatttgggaatttt
ggaaccagtactagcagtggaggactctttggaactacaaataccacctctaatcctttt
ggtaacacatctggctccctctttgggccaagtagttttacagcagcacctacaggaact
accatcaaatttaatcctcccactggtacagatactatggtcaaagctggagttagcact
aacatcagcaccaagcatcagtgtattactgccatgaaagaatatgaaagcaagtcatta
gaggagcttcgtttggaggactatcaggctaaccggaaaggcccacagaaccaagtgggg
gcaggtaccacaactggcttatttgggtcttctccagcgacttccagtgcaacaggactc
ttcagctcttccaccactaattcagccttttcatatggtcagaacaaaactgcctttgga
actagcacaactggatttgggacaaatccaggtggcctctttggccaacagaatcaacag
actaccagtctcttcagcaaaccatttggccaggctacaaccaccccaaatactggcttt
tcctttggtaataccagcacccttggacaaccaagcaccaatactatgggcctatttgga
gtaacccaagcctcacagccaggaggtctttttgggaccgctacaaacaccagcactggg
acagcatttgggacaggaacaggtctctttgggcagcccaatactggatttggtgcagtt
ggttcgacgctgtttggcaataacaagcttacaacttttggaaccagcacaaccagtgct
ccctcatttggtacaaccagtggcgggctcttcggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggcacaaataacagtgggagtagtattttt
ggaagtaagccagcagccgggactctgggaacaggacttggtacaggatttggaacagct
cttggtgctggacaggcatctttgtttggaaacaaccaacctaagattggagggcctctt
ggtacaggagcctttggggcccctggatttaatacttcgactgccattttgggctttggc
gccccccaggccccagtagctttgacagatccaaatgcttctgctgcccagcaggctgtt
ctccagcagcacctcaatagtctaacatactcaccctttggagactcccctctcttccgg
aatcctatgtcagatcctaagaagaaagaagagagactgaaaccaaccaatccagcagct
cagaaagctcttacaacccctactcattataaacttacacctcgccctgccaccagagtc
agaccaaaggctttgcaaacaacaggtacagccaaatcacatctctttgatgggctggat
gacgatgaaccatctctagccaacggagcgtttatgcctaaaaagagcatcaagaagttg
gttttgaaaaatcttaacaatagcaatctcttttctcctgttaatcatgattcagaagat
ctagcttcaccctctgagtatccagaaaatggagagagattcagcttcctgagcaaacct
gttgatgagaaccatcagcaggatggagatgatgactctcttgtatcacgattttacact
aatcctattgccaaacctattccacaaactccagagagtgctggaaacaaaaataacagt
agcagcaatgtggaagacactttcattgctttgaacatgcgtgctgctttgcgaaatgga
ctggaaggaagcagtgaagaaacgtctttccatgatgagtcattgcaagatgaccgagac
gagatagaaaacagtgctttccaaatccatccagcaggcattgttctcacaaaagttggt
tattatactattccatctatggatgaccttgctaaaattaccaatgagaaaggagaatgc
attgtttctgacttcaccattggccgtaaagggtatggctcaatctattttgaaggagat
gtgaatttgacaaatctaaatttggatgacattgtgcatatccggaggaaagaagttatt
gtctatgtagatgataaccaaaagccacctgtgggtgaaggactaaataggaaggctgaa
gttactttggatggagtttggccaacagataaaacatcccggtgtttaataaagagtcca
gatcgacttgctgatatcaattatgaggggagattagaagcagtctcaagaaagcaaggg
gcccaattcaaggagtatcggcctgaaactggttcttgggtgtttaaggtttcccatttt
tctaagtatggccttcaggattctgatgaagaggaggaggaacacccacccaaaactact
tcaaagaagctgaagactgcccctttgccccctgcaggccaggcaaccactttccagatg
actcttaatggcaaacctgcacccccacctcagagccagagcccagaagtggagcagtta
gggagggttgtggagctggacagcgacatggtagatatcacgcaggagccagttccggat
tcggtgttagaagagagtgtacctgaggatcaggagcccgtgtccgcatcaacacagatc
gcgtcttcactgggaattaatccacatgtgttacagatcatgaaagcatccttgcttgtg
gatgaagaagacgtagatgccatggagcagcgcttcggtcacttcccttccagaggagac
actgctcaggagatctgctcccctagactccccatttcagcctcccactcctcaaaatcc
cgctccatagttggtgggttgctccaatcaaaatttgcaagtggaacttttctttcacca
agtgcctccgtgcaagaatgtcgcacacccagaacatcatctctaatgaacgtcccatcc
acatccccctggtctgtccctctacccctggccactgtgttcacagtgcccagcccagcc
cctgaagttcccctaaaaacagtggggatacgcaggcaaccaggcctagtccctcttgaa
aaatccattacatatggcaagggaaaactcttgatggacatggccttattcatgggacgt
tcatttcgggttggctggggtcccaactggactcttgcaaatagtggagaacaactgcat
ggctctcatgaactggaaaatcatcaggttgccgagtctatggaatacggattcctgccc
aatccagtagctgttaaatctctatctgaatccccattcaaagttcatttggaaaaactc
ggcttgagacagaggaagctggatgaggatctgcagttataccagacacctctagagctc
aaattaaaacatagcactgtgcatgtagatgagctgtgtcctctcatcgtccccaatcct
ggggtttcagtcattcatggttatgcagattgggttaagaaatcacccagagatttactg
gaactaccaattgtgaagcactggagcctgacgtggacattatgtgaagccctatggggc
cacctgaaggagcttgacagccagctggatgagcccagtgaatacattcagactctggag
cggagaagagctttttcccgctggctgtcccacactgctgcacctcagatagaagaggaa
gtctccttaacccgcagagacagtcccatagaggctgtcttcagctacctcacgggcagt
agaattagtgaggcctgttgtctggcacagcagtcaggtgatcatcgccttgcccttctt
ctgtctcagctggtgggaagccagtcagtccgggagctgctcaccatgcagttggctgat
tggcatcagctccaggctgactccttcatccacgatgagcggttgcgcatatttgccctg
ttagctggaaaaccggtgtggcagctctcagaacagaaacaaatcaatgtatgctcccag
ctagattggaaacgaacacttgctatccatctttggtatttgcttccaccaactgcctcc
atttccagggctctcagcatgtatgaagaagcatttcagaatacttgtgagggtgataaa
tatgcctgtccccctcttccttcttacctggagggcagtggctgtgtggtagaggaagaa
aaagacccccagagaccacttcaagacgtttgctttcatcttctaaagctctacagtgac
agacattatggtctcaatcagctcttggaaccccgaagcataactgcagatcctttggac
taccgcctaagctggcacctttgggaagtgctccgtgctcttaactatacacatctctca
gaacagtgtgagggcgtgctacaggccagttatgctggccagctggaaagtgaaggactc
tgggagtgggccatctttgtctttctgcacattgacaactcaggcatgcgtgagaaggct
gttcgagaactgctgacccggcactgccaactctcagagacccctgagtcttgggctaag
gagactttccttactcagaagctttgtgtgcctgctgagtggattcatgaggccaaagca
gttcgtgcacacatggaatccaataagcacttggaggccctctatttatttaaagctggt
cactggaaccgctgccacaaactagtcgttcggcacctagcttctgatgccattattaat
gagaactatgactacctgaaaggtttcttagaagatctggcacctccagagcgcagcagc
ctaattcaggactgggaaacatctgggcttgtttacttggattacattcgagtaattgaa
atgctccaccgtattcagcaggtggattgctcaggctatgaactagagcacttacatacc
aaagtgacttcactgtgtaaccggatagagcagattccgtgctacaatgccaaggatcgc
ctggctcagtcagatatggccaagcgggtagccaacttactgcgggtagttctgagcctt
cagcacactcctgacgccacctccaactccactccggaccctcagcgagtccctttgcgt
cttttggctccccacattggcaggctccctatgcctgaggactatgccttggaggaactg
cgaggccttacccagtcctaccttcgagaactgactgttgggagccaatga
DBGET
integrated database retrieval system
