Rattus norvegicus (rat): 81785
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Entry
81785 CDS
T01003
Symbol
Ssrp1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
81785 (Ssrp1)
03036 Chromosome and associated proteins [BR:
rno03036
]
81785 (Ssrp1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
81785 (Ssrp1)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
81785 (Ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
bPH_2
Motif
Other DBs
NCBI-GeneID:
81785
NCBI-ProteinID:
NP_112383
RGD:
621143
Ensembl:
ENSRNOG00000008825
UniProt:
Q04931
A6HMS9
LinkDB
All DBs
Position
3:90531024..90541132
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AA seq
709 aa
AA seq
DB search
MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE
SFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRKKSSEGKK
GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA
EDARREYEKAMKEYEGGRGDSSKRDKSKKKKKVKAKLEKKSTPSRGSSSKSSSRQLSDSF
KSKEFVSSDESSSGENKSKKKRRRSEDSDEEELASTPPSSEDSASGSDE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacattggagttcaacgacatcttccaggaggtgaaagggtccatgaatgat
gggaggcttcgattgagccgtcagggtatcatctttaagaacagcaagacgggcaaagtg
gacaacatccaggccggggagttgaccgaaggcatctggcgtcgggtagcattaggccat
ggacttaaactgctcacaaagaatgggcatgtctacaagtatgatggcttccgtgaatcg
gaatttgagaagctctctgactttttcaaaacccactatcgccttgagctgatggagaag
gatctctgtgtgaagggctggaactgggggacagtgaaatttggtgggcagctgctttct
tttgacattggtgatcaaccagtctttgagatacccctaagcaatgtgtcccagtgtaca
acaggcaagaatgaggtgaccctggaattccaccagaacgatgatgctgaagtatctctc
atggaggtgcgcttctatgtccctcccacgcaggaagatggagtggaccctgtggaggcc
tttgcccagaatgtcctgtcaaaggcagatgtgatccaggccactggagatgccatctgc
atcttccgggagctgcagtgtttgactcctcgtggtcgttacgatatccggatctaccct
acctttctacacctgcatggcaaaacctttgactacaagatcccctatactacagttctc
cgtctcttcctactgccccacaaggatcagagacagatgttctttgtgatcagcctggat
ccccccatcaagcagggccaaactcgttaccacttcctgatcctcctcttctcaaaggat
gaggacatctccttgactctcaacatgaatgaggaagaagtagaaaagcgctttgagggg
cgactcaccaagaacatgtcaggatccctttatgagatggttagccgggtcatgaaagca
cttgtaaaccgtaaaatcacagtcccaggcaacttccaagggcattcgggggcccagtgt
atcacctgctcctataaggccagctcaggactcctgtacccactggagcggggcttcatc
tatgtgcacaagccccctgtgcacatccgcttcgatgagatctctttcgtcaactttgcc
cgtggcaccacaaccactcgttccttcgactttgagattgagaccaagcaaggcactcag
tataccttcagcagcattgagcgggaagagtatggaaagctgtttgattttgtcaatgca
aaaaagctcaacatcaagaacagagggctgaaagagggcattaacccaggttatgatgat
tacgctgactctgatgaagaccagcatgatgcctatttggagaggatgaaggaggagggc
aagatccgggaggagaatgccaatgacagcagtgacgactcaggagaagaaactgatgag
tccttcaatcctggtgaagaagaagaagatgtggcagaggagtttgatagcaatgcctct
gccagctcctccagtaatgagggcgacagcgaccgagaagagaagaagcggaaacagctc
aaaagagccaagatggccaaggatcggaagagccgcaagaagtcttcagaggggaagaag
ggtaaggatccaaatgcccccaagaggcctatgtctgcgtacatgttgtggcttaatgca
agccgagagaagatcaagtcagatcaccctggcatcagcatcacagatctttccaagaag
gcaggcgaaatctggaagggaatgtccaaagagaagaaagaggagtgggaccgcaaggcc
gaggatgctaggagggagtatgagaaagccatgaaagagtatgaaggaggacgaggggac
tcgtctaaaagggacaagtctaagaagaaaaagaaagtaaaagcaaagttggaaaagaaa
tccactccttcccggggctcatcatccaagtcttcatccaggcagttgagcgacagcttc
aagagcaaagagtttgtgtccagtgacgagagctcttcaggcgagaacaagagcaaaaag
aagaggaggcggagcgaggactctgatgaagaggaactagccagtactcctccaagctca
gaggactctgcctcaggatctgatgagtag
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