Rattus norvegicus (rat): 81827
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Entry
81827 CDS
T01003
Symbol
Psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03050
Proteasome
rno05010
Alzheimer disease
rno05012
Parkinson disease
rno05014
Amyotrophic lateral sclerosis
rno05016
Huntington disease
rno05017
Spinocerebellar ataxia
rno05020
Prion disease
rno05022
Pathways of neurodegeneration - multiple diseases
rno05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
81827 (Psmc5)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
81827 (Psmc5)
09164 Neurodegenerative disease
05010 Alzheimer disease
81827 (Psmc5)
05012 Parkinson disease
81827 (Psmc5)
05014 Amyotrophic lateral sclerosis
81827 (Psmc5)
05016 Huntington disease
81827 (Psmc5)
05017 Spinocerebellar ataxia
81827 (Psmc5)
05020 Prion disease
81827 (Psmc5)
05022 Pathways of neurodegeneration - multiple diseases
81827 (Psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rno03051
]
81827 (Psmc5)
Proteasome [BR:
rno03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
81827 (Psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
RuvB_N
OB_PRS7
TIP49
AAA_18
AAA_14
AAA_28
Mg_chelatase
AAA_3
NPHP3_N
AAA_33
Parvo_NS1
ATPase
PhoH
AAA_17
FapA
IstB_IS21
DUF815
AAA_7
AAA_25
AAA_24
DUF7006
Sigma54_activat
DUF5906
bpMoxR
RNA_helicase
ABC_tran
NB-ARC
TsaE
Zeta_toxin
AAA_11
AAA_19
HR1
DUF7121
Prominin
Motif
Other DBs
NCBI-GeneID:
81827
NCBI-ProteinID:
NP_112411
RGD:
708376
Ensembl:
ENSRNOG00000010038
UniProt:
P62198
Structure
PDB
PDBj
LinkDB
All DBs
Position
10:91687553..91693487
Genome browser
AA seq
406 aa
AA seq
DB search
MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgggccagagcagatggaactggaagaggggaaggcaggcagtggactc
cgtcaatattatctgtccaagattgaagaactccagttgattgtgaatgacaagagtcag
aacctccggagactgcaggcccagaggaatgagctcaatgcaaaagttcgtctgttgcgg
gaggaactgcagctgctgcaggaacagggctcctacgttggagaagtcgtgagggccatg
gataagaaaaaagtgttggtcaaggtccatcctgagggcaaatttgttgttgatgtggac
aagaacattgatatcaatgatgtgacacccaattgtcgggtggctctaagaaatgacagc
tacactctgcataagatcctgcctaacaaagtggaccctttggtatcactaatgatggtg
gaaaaggtgccagactcaacctacgagatgattggcgggctagacaagcagatcaaggag
atcaaagaagtgattgagctgcctgtgaagcaccctgagctctttgaagccctgggcatt
gcacagccaaagggagtcctgctatatggacccccgggcactgggaagacgttgttggcc
cgggctgtggctcatcatacggactgtacctttattcgtgtctctggctctgaactggta
cagaaattcattggggaaggggcaagaatggtgagggagctgtttgtcatggcccgagaa
catgctccctccatcatcttcatggacgagatcgactctatcggttcttcacggctggag
ggaggctctggaggcgacagtgaggtacagcgcacaatgctggaactgctcaaccagctg
gatggctttgaggccactaagaatatcaaggttatcatggctactaataggattgatatc
ctggactctgccctgcttcgtcctgggaggattgacaggaaaattgaattcccacctccc
aatgaggaggcccggctggacattttgaaaatccactctcggaaaatgaacttgaccagg
gggatcaacctgaggaaaattgctgagttgatgccaggagcttcaggggctgaagtgaag
ggcgtgtgcacagaggccggcatgtatgctctgcgggaacggcgtgtccacgttactcag
gaggactttgagatggcagtagccaaggtcatgcaaaaggatagtgagaaaaacatgtcc
atcaagaagctttggaagtga
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integrated database retrieval system
