KEGG   Rattus norvegicus (rat): 83497
Entry
83497             CDS       T01003                                 
Symbol
Ocln
Name
(RefSeq) occludin
  KO
K06088  occludin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03272  Virion - Hepatitis viruses
rno04514  Cell adhesion molecules
rno04530  Tight junction
rno04670  Leukocyte transendothelial migration
rno05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    83497 (Ocln)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    83497 (Ocln)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    83497 (Ocln)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    83497 (Ocln)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    83497 (Ocln)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    83497 (Ocln)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     83497 (Ocln)
SSDB
Motif
Pfam: Occludin_ELL MARVEL APG6_N Knl1_RWD_C FoP_duplication FapA
Other DBs
NCBI-GeneID: 83497
NCBI-ProteinID: NP_112619
RGD: 620089
Ensembl: ENSRNOG00000018297
UniProt: Q6P6T5 A6I594
LinkDB
Position
2:complement(33391303..33442207)
AA seq 523 aa
MSVRPFESPPPYRPDEFKPNHYAPSNDMYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLVIVMCIAVFACVASTLAWDRAYGTGIFGGSMNYPYGSGFGSYGGGFGGY
GYGYGYGYGGYTDPRAAKGFLLAMAAFCFIASLVIFVTSVIRSGMSRTRRYYLIVIIVSA
ILGIMVFIATIVYIMGVNPTAQASGSMYGSQIYTICSQFYTPGGTGLYVDQYLYHYCVVD
PQEAIAIVLGFMIIVAFALIIVFAVKTRRKMDRYDKSNILWDKEHIYDEQPPNVEEWVKN
VSAGTQDMPPPPSDYAERVDSPMAYSSNGKVNGKRSYPDSLYKSPPLVPEVAQEIPLTLS
VDDFRQPRYSSNDNLETPSKRTPTKGKAGKAKRTDPDHYETDYTTGGESCDELEEDWLRE
YPPITSDQQRQLYKRNFDAGLQEYKSLLAELDEVNKELSRLDRELDDYREESEEYMAAAD
EYNRLKQVKGSADYKSKKNYCKQLKSKLSHIKRMVGDYDRRKT
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgtctgtgaggccttttgagagtccacctccttacaggccggatgaattcaaacccaat
cattatgcaccaagcaatgacatgtatggcggagagatgcacgttcgaccaatgctctct
cagccggcatactctttttacccggaagacgaaattcttcacttctacaagtggacgtcg
cctccaggggtgattcggatcctgtctatgctcgtcatcgtgatgtgcatcgctgtattc
gcctgcgtggcttccacacttgcttgggacagagcctatggaacgggcatctttggagga
agtatgaactacccttacggcagcggcttcggtagctatggaggtggcttcggaggttac
ggttacggctacggttacggctacggagggtacacagaccccagagcggcaaagggtttc
ctgctggccatggcggccttttgcttcatcgcttccttggtgatctttgttaccagcgtc
attagatcgggaatgtccagaacgagaagatactacttgatcgtgatcatagtcagcgca
atcctgggcatcatggtgttcattgccacgatcgtgtacataatgggagtcaacccgact
gcccaggcttctggatctatgtacggttcacagatctataccatctgcagccagttttat
actcctggaggcactggtctctacgtggaccaatatttgtatcactactgtgtggtggat
ccccaggaggctatagccattgtcctggggttcatgattattgtggcttttgctttaatc
attgtttttgctgtgaaaacccgaagaaagatggaccggtatgataagtctaatattttg
tgggataaggaacacatttatgatgaacagccccctaatgtggaagagtgggttaaaaat
gtgtctgcaggcacacaagacatgcctccacccccatctgactatgcggaaagagtcgac
agtccgatggcctactcctccaacggcaaagtgaatggcaagagatcctacccagactct
ttgtataagtcaccgcctctggtacctgaagtagcccaggagattcctctgaccttgtcc
gtggatgacttcaggcagcctcggtacagcagcaacgataacctagagacaccttctaaa
aggactcccacgaaggggaaagcagggaaggcgaagaggacagacccagaccactatgaa
accgactacacgacaggtggcgagtcctgcgatgagctggaggaggactggctcagggaa
tatccacctatcacttcagatcaacagagacaactgtacaagagaaattttgatgcaggt
ttacaggagtataagagtttactggcagaactcgacgaggtcaacaaagagctctctcgt
ctcgacagagaactggatgactacagagaggagagcgaagagtacatggctgctgctgat
gaatataacagactaaagcaagttaagggatctgcagattataaaagcaagaagaattac
tgcaagcagttaaagagcaaattatcacacatcaagaggatggtgggagactatgacaga
cggaaaacctag

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