Rattus norvegicus (rat): 83497
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Entry
83497 CDS
T01003
Symbol
Ocln
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03272
Virion - Hepatitis viruses
rno04382
Cornified envelope formation
rno04514
Cell adhesion molecules
rno04530
Tight junction
rno04670
Leukocyte transendothelial migration
rno05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
83497 (Ocln)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
83497 (Ocln)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
83497 (Ocln)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
83497 (Ocln)
09158 Development and regeneration
04382 Cornified envelope formation
83497 (Ocln)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
83497 (Ocln)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rno01009
]
83497 (Ocln)
Protein phosphatases and associated proteins [BR:
rno01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
83497 (Ocln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
APG6_N
Knl1_RWD_C
FoP_duplication
FapA
Motif
Other DBs
NCBI-GeneID:
83497
NCBI-ProteinID:
NP_112619
RGD:
620089
Ensembl:
ENSRNOG00000018297
UniProt:
Q6P6T5
A6I594
LinkDB
All DBs
Position
2:complement(33391303..33442207)
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AA seq
523 aa
AA seq
DB search
MSVRPFESPPPYRPDEFKPNHYAPSNDMYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLVIVMCIAVFACVASTLAWDRAYGTGIFGGSMNYPYGSGFGSYGGGFGGY
GYGYGYGYGGYTDPRAAKGFLLAMAAFCFIASLVIFVTSVIRSGMSRTRRYYLIVIIVSA
ILGIMVFIATIVYIMGVNPTAQASGSMYGSQIYTICSQFYTPGGTGLYVDQYLYHYCVVD
PQEAIAIVLGFMIIVAFALIIVFAVKTRRKMDRYDKSNILWDKEHIYDEQPPNVEEWVKN
VSAGTQDMPPPPSDYAERVDSPMAYSSNGKVNGKRSYPDSLYKSPPLVPEVAQEIPLTLS
VDDFRQPRYSSNDNLETPSKRTPTKGKAGKAKRTDPDHYETDYTTGGESCDELEEDWLRE
YPPITSDQQRQLYKRNFDAGLQEYKSLLAELDEVNKELSRLDRELDDYREESEEYMAAAD
EYNRLKQVKGSADYKSKKNYCKQLKSKLSHIKRMVGDYDRRKT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaggccttttgagagtccacctccttacaggccggatgaattcaaacccaat
cattatgcaccaagcaatgacatgtatggcggagagatgcacgttcgaccaatgctctct
cagccggcatactctttttacccggaagacgaaattcttcacttctacaagtggacgtcg
cctccaggggtgattcggatcctgtctatgctcgtcatcgtgatgtgcatcgctgtattc
gcctgcgtggcttccacacttgcttgggacagagcctatggaacgggcatctttggagga
agtatgaactacccttacggcagcggcttcggtagctatggaggtggcttcggaggttac
ggttacggctacggttacggctacggagggtacacagaccccagagcggcaaagggtttc
ctgctggccatggcggccttttgcttcatcgcttccttggtgatctttgttaccagcgtc
attagatcgggaatgtccagaacgagaagatactacttgatcgtgatcatagtcagcgca
atcctgggcatcatggtgttcattgccacgatcgtgtacataatgggagtcaacccgact
gcccaggcttctggatctatgtacggttcacagatctataccatctgcagccagttttat
actcctggaggcactggtctctacgtggaccaatatttgtatcactactgtgtggtggat
ccccaggaggctatagccattgtcctggggttcatgattattgtggcttttgctttaatc
attgtttttgctgtgaaaacccgaagaaagatggaccggtatgataagtctaatattttg
tgggataaggaacacatttatgatgaacagccccctaatgtggaagagtgggttaaaaat
gtgtctgcaggcacacaagacatgcctccacccccatctgactatgcggaaagagtcgac
agtccgatggcctactcctccaacggcaaagtgaatggcaagagatcctacccagactct
ttgtataagtcaccgcctctggtacctgaagtagcccaggagattcctctgaccttgtcc
gtggatgacttcaggcagcctcggtacagcagcaacgataacctagagacaccttctaaa
aggactcccacgaaggggaaagcagggaaggcgaagaggacagacccagaccactatgaa
accgactacacgacaggtggcgagtcctgcgatgagctggaggaggactggctcagggaa
tatccacctatcacttcagatcaacagagacaactgtacaagagaaattttgatgcaggt
ttacaggagtataagagtttactggcagaactcgacgaggtcaacaaagagctctctcgt
ctcgacagagaactggatgactacagagaggagagcgaagagtacatggctgctgctgat
gaatataacagactaaagcaagttaagggatctgcagattataaaagcaagaagaattac
tgcaagcagttaaagagcaaattatcacacatcaagaggatggtgggagactatgacaga
cggaaaacctag
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