Rattus norvegicus (rat): 83581
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Entry
83581 CDS
T01003
Symbol
Polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
83581 (Polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
83581 (Polr1a)
Enzymes [BR:
rno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
83581 (Polr1a)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
83581 (Polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
83581
NCBI-ProteinID:
NP_113960
RGD:
620824
Ensembl:
ENSRNOG00000009545
UniProt:
O54889
A6IA93
G3V7B7
LinkDB
All DBs
Position
4:105508305..105572272
Genome browser
AA seq
1716 aa
AA seq
DB search
MLASKHTPWRRLQGISFGMYSAEELKKLSVKSITNPRYVDSLGNPSADGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAAIHLL
VCQLKVLDVGALQAVYELERILSRFLEETSDPSAFEIQEELEEYTSKILQNNLLGSQGAH
VKNVCESRSKLVAHFWKTHMAAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHKKSGQKDA
ELPEGAPAAPGIDEAQMGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDIGPESSFN
PSMFFLDFIVVPPSRYRPINRLGDQMFTNGQTVNLQAVMKDAVLIRKLLAVMAQEQKLPC
EMTEITIDKENDSSGAIDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSDMDKLMLEK
YPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVT
PWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDATQREAVAKQLLTPSTGIPKPQ
GAKVVCRHVKNGDILLLNRQPTLHRPSIQAHRAHILPEEKVLRLHYANCKAYNADFDGDE
MNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQY
MELVYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYTPLNLTGKAKIGS
KAWVKEKPRPVPDFDPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGET
SGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPNADVMRQRIIEESTQCGPRAVRAALNL
PEAASCDEIQGKWQDAHLGKDQRDFNMIDMKFKEEVNHYSNEINKACMPFGLHRQFPENN
LQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTG
RFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGS
VVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKVLRHFRAIK
KWHHRHSSALLRKGAFLSFSQKIQAAVKALNLEGKTQNGRSPETQQMLQMWHELDEQSRR
KYQKRAAPCPDPSLSVWRPDIHFASVSETFEKKIDDYSQEWAAQAEKSHNRSELSLDRLR
TLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILM
VASANIKTPMMSVPVFNTKKALRRVKSLKKQLTRVCLGEVLQKVDIQESFCMGEKQNKFR
VYELRFQFLPHAYYQQEKCLRPEDILHFMETRFFKLLMEAIKKKNSKASAFRSVNTRRAT
QKDLDDTEDSGRNRREEERDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEG
EEEEEEDVQEEENIKGEGAHQTHEPDEEEGSGLEEESSQNPPRRHSRPQGAEAMERRIQA
VRESHSFIEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHNAIVYTTKGITRCLL
NETINSKNEKEFVLNTEGINLPELFKYSEVLDLRRLYSNDIHAVANTYGIEAALRVIEKE
IKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQA
TMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgctggcctccaagcacacgccatggcggcggcttcagggcatttccttcgggatgtat
tcggccgaggagctcaagaagttaagtgttaagtccattacaaatcctcgctatgtggac
agcctgggaaacccttcggcagatggcctgtatgatttggctttgggtcctgcagattcc
aaagaagtatgctctacctgtgtgcaggacttcaacaactgctccggacacctgggccac
attgacctcccgctcacagtgtacaaccctctcctcttcgataaactctacctgctgctg
cgaggctcctgtttaaattgtcatatgctgacttgtcctcgggctgcaattcacctattg
gtctgccagctgaaggtcctagacgttggagccctacaagcagtctatgagcttgagcgg
attctcagcaggtttctggaagaaacttcggatccttctgccttcgaaattcaagaagag
ttagaagagtacacaagcaaaattctgcagaataacctcctggggtcccagggtgcacat
gtgaaaaatgtgtgcgagagcagaagcaaacttgtcgctcacttctggaagacacacatg
gctgctaagcgctgtccacactgcaagacgggacggtcagtggttcgaaaggagcacaat
agtaagctaacaataacatatccagccatggtgcacaagaagtctggccagaaggatgca
gaactcccagaaggagcaccagcagctccaggaattgatgaggctcagatggggaaacga
ggatacttgaccccaagcagcgcccaagaacatcttttcgccatttggaagaatgaagga
ttcttcctgaattatcttttttcgggattggatgatattggcccagagtccagtttcaac
cccagtatgttctttctagatttcatcgtggtaccgccatccaggtatcgtcccatcaat
cgcctgggtgaccagatgttcactaatggccagacagtgaatttgcaagcggtcatgaag
gatgcagttttgatccggaaacttctggcagtgatggcccaagaacagaaactgccctgt
gagatgacagaaatcaccatagacaaggaaaatgactcctcgggtgctatcgaccggtcc
tttctgagtttgcttccaggacagtctctcacagataaactttacaatatttggattcgc
ctccagagccacgtcaatattgtgtttgacagtgacatggacaaactgatgctggaaaag
taccctggcataagacagatcctcgagaagaaggaaggcctgttccggaagcacatgatg
ggaaagcgagtggactacgcagcccgctcggtcatctgcccagatatgtacatcaacacc
aatgagatcgggattcccatggtatttgccacaaaactgacttacccccagccagttacc
ccctggaacgtgcaggaactgagacaggcagtcatcaatggacccaatgtgcacccagga
gcctccatggtcatcaacgaggatggcagtcgcacagccctgagcgcagtggatgctaca
cagcgggaagctgtggccaaacagctcctgacaccgtccacagggatccctaagcctcag
ggagcaaaagttgtgtgccggcatgtgaagaatggggacattctcctcctgaaccgacag
cccaccttgcacagaccctccatccaggcccaccgtgcccacattctgcctgaggaaaaa
gtcctgcgccttcactatgccaactgcaaggcctacaatgctgacttcgatggagacgag
atgaatgcccacttcccccagagtgagctgggccgagctgaagcctatgtcctggcctgc
actgaccagcagtatcttgttcccaaggatggccagcccttggcaggactgattcaggat
cacatggtgtcgggtgcaaacatgaccattcggggatgctttttcacccgggaacagtac
atggagctggtgtaccgagggctcacagacaaagtgggacgcgtgaagctctttcctcct
gccatcctgaagcccttcccgctgtggacaggaaagcaggtcgtgtcgaccctcctcata
aacataatcccagaggactacacccccctgaatttaactggaaaggcaaaaatcggcagt
aaagcctgggtgaaggaaaagcctcggcctgttcctgactttgaccctgactccatgtgt
gagtcccaggtgatcatcagggaaggggagctgctctgcggggtgctggacaaggcacac
tatgggagctctgcctacggcctggtccactgctgctacgagatctatgggggtgagacc
agcggcagggttctcacctgcttagcccgcctcttcactgcctacctacagctctatcga
ggtttcaccttgggtgtggaagacattttggttaagccaaatgcagatgtgatgagacag
cgcatcattgaagaatctacccagtgtggaccccgggctgtcagggctgcgttgaacctg
ccagaggctgcatcatgtgatgagatccaggggaaatggcaggatgcccatctgggcaaa
gaccagagggattttaacatgattgatatgaagttcaaggaggaagtgaaccattacagc
aatgagattaacaaggcatgtatgccttttggcttgcacagacaattccctgaaaacaac
ctgcagatgatggtgcagtcgggagccaaagggtcgaccgtgaacacgatgcaaatctct
tgcctgctgggccaaattgagttggaaggtcggagacccccactgatggcgtctggcaag
tcactgccctgctttgagccttacgagttcaccccaagggctggtggctttgtcactgga
aggttccttaccggtatcaggccacctgagttcttcttccactgcatggcggggcgagaa
ggcctggtggatactgctgtcaagaccagccgttctggctatctccaaaggtgtatcatc
aagcacctggagggtctggtcatccagtacgatctcacggtccgtgacagtgatggcagt
gtggtacagttcctgtatggggaggatggcctggacatccccaagacacagttcctacaa
cccaagcagttcccctttctggccagcaattatgaggtgataatgaaatccaagcatctt
catgaagttttgtctagagcagatccccagaaagtgctccgccacttcagagccattaaa
aaatggcaccacaggcattccagtgccctgctgagaaaaggcgccttcctgagtttttcc
cagaagattcaggcagctgtgaaagccttgaacctagagggcaagacccagaatgggcgc
agcccagagacccagcagatgttacagatgtggcatgaattagatgagcagagccgacgg
aaataccagaagagggctgccccgtgtcccgaccctagcctttctgtgtggcgcccagac
atccacttcgcatctgtgtctgaaacatttgaaaaaaagattgatgactacagtcaggag
tgggcagctcaagcagagaagagtcacaacagatcagagctttctcttgacaggctgaga
accttactgcagctcaagtggcagcgctcactgtgtgacccaggcgaggctgttggcctc
ctggccgcccagagcatcggagagccctccacacagatgacactgaacaccttccacttt
gcaggcagaggcgagatgaacgtcaccctgggcattccaagattgagggagattctcatg
gtggccagtgccaacatcaaaacacccatgatgagcgtgcctgtgttcaacaccaagaaa
gcactgaggagagtgaagagtctgaagaagcagctcaccagggtgtgcctgggggaggta
ttgcagaaagttgacatccaggagtccttctgtatgggagagaaacagaataaattccgg
gtgtatgagctccggtttcagttcctgccacatgcatattaccagcaggagaagtgcctg
agacccgaggacatcttgcacttcatggaaaccagattctttaagctactaatggaagct
atcaaaaagaagaatagcaaagcatcagccttcagaagtgtgaataccaggagagctaca
cagaaggacctcgatgacactgaggactcggggaggaatcggagagaggaggaaagggat
gaggaagaggaggggaacattgtggatgctgaagctgaggagggggatgcagatgcttct
gacaccaaacgcaaggagaagcaagaagaagaggttgactatgagagtgaggaagaaggg
gaggaggaagaggaagaggatgtacaagaagaggagaacatcaaaggtgaaggtgcccac
cagacccatgagccagatgaggaagaaggttcaggccttgaggaggaatcatcccagaac
cctccccgccgccattccaggcctcagggagctgaggccatggaacgccgaatccaggct
gtacgggagtcccattcgttcattgaggactaccagtatgacacagaggagagcctgtgg
tgccaggtgacagtgaagctcccattgatgaagattaattttgacatgagctccttggtt
gtatccttggcccacaatgccattgtctatacgactaagggcatcactcggtgtctcctg
aatgaaacgatcaacagtaagaatgagaaggagtttgtcctgaacacggagggaatcaac
ctccccgagctgttcaagtactccgaggtgctggacctgcgccgcctgtactccaacgac
atccatgctgtggccaatacgtacggcatcgaggctgcgctgcgggtgatagagaaggag
attaaggatgtgtttgctgtgtacggcattgcggttgatcctcgccatctctccctggtt
gctgattatatgtgttttgagggtgtttataagccactcaatcgctttgggatccagtca
agctcctcccctttgcagcagatgacgtttgaaaccagcttccagtttctgaaacaggcc
accatgatgggatcccatgatgaactgaagtcaccttctgcctgccttgtggtgggaaag
gtcgtcaaaggcgggacaggcctgtttgagctcaagcagcccctaagatag
DBGET
integrated database retrieval system
