Rattus norvegicus (rat): 83806
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Entry
83806 CDS
T01003
Symbol
Psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03050
Proteasome
rno05010
Alzheimer disease
rno05012
Parkinson disease
rno05014
Amyotrophic lateral sclerosis
rno05016
Huntington disease
rno05017
Spinocerebellar ataxia
rno05020
Prion disease
rno05022
Pathways of neurodegeneration - multiple diseases
rno05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
83806 (Psmd1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
83806 (Psmd1)
09164 Neurodegenerative disease
05010 Alzheimer disease
83806 (Psmd1)
05012 Parkinson disease
83806 (Psmd1)
05014 Amyotrophic lateral sclerosis
83806 (Psmd1)
05016 Huntington disease
83806 (Psmd1)
05017 Spinocerebellar ataxia
83806 (Psmd1)
05020 Prion disease
83806 (Psmd1)
05022 Pathways of neurodegeneration - multiple diseases
83806 (Psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rno03051
]
83806 (Psmd1)
Proteasome [BR:
rno03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
83806 (Psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
HEAT
PA26
Tim54
Motif
Other DBs
NCBI-GeneID:
83806
NCBI-ProteinID:
NP_114184
RGD:
621669
Ensembl:
ENSRNOG00000017730
UniProt:
O88761
G3V8B6
A6JWF9
Structure
PDB
PDBj
LinkDB
All DBs
Position
9:94157971..94233218
Genome browser
AA seq
953 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE
GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS
LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGPEKDSDSMETE
EKTAGAVAGKTPDASPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG
LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR
RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGVCC
AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDK
HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS
LAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK
KKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMTETCRY
QPFKPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcagccgctggaattatttctcttctggatgaagaagagccacagctcaag
gaatttgcactacacaaattgaatgcagttgtgaatgacttctgggcagaaatttctgag
tctgtagacaaaatagaagttttatatgaagatgaaggtttccgcagtcggcagtttgca
gccttggtggcatcgaaagtattttatcacctgggggctttcgaggagtctctgaattat
gctcttggagcaggtgacctcttcaatgtcaatgataactctgaatatgtggagactatt
atagcaaaatgcattgatcattataccaaacagtgtgtggaaaatgcagatttgcctgaa
ggagaaaagaagccaattgaccagagattggaaggcatcgtgaataagatgttccagcga
tgtctcgatgatcacaagtataagcaagcgattggcattgctctggagaccaggagacta
gatgtctttgagaagactatactggaatctaatgatgtcccaggaatgctagcttacagc
ctcaagctctgcatgtctttaatgcagaataagcagtttcggaataaagtattgcgagtc
ctggttaaaatctacatgaacttggaaaaacctgatttcatcaatgtttgtcagtgctta
atcttcttagatgacccccaggccgtgagtgatatcttagaaaagctggtaaaggaagac
aacctgctgatggcctatcagatttgctttgatttgtacgaaagtgccagccagcagttt
ttgtcatctgtgatccagaatcttcgaactgttgggacccctattgcttctgtgcctgga
tctaccaatacgggtactgtgccaggaccagagaaagacagtgactctatggagaccgag
gagaagacagccggtgcagtggcagggaaaacaccagacgctagtccagagcccaaggac
cagacattgaaaatgattaaaattttaagtggtgaaatggctatcgagttacacctgcag
ttcctaatacgcaataataacacagacctcatgattctgaaaaacacaaaggatgcagta
cgaaattctgtatgtcatacagcaactgtaatagcaaactcattcatgcactgtgggact
accagtgaccagttccttagagataacttggaatggctggccagagccactaactgggcc
aaatttactgcaactgccagcttgggtgtaatccataagggccatgagaaggaagcacta
cagttaatggcaacatacctccctaaggacacttctccaggatcagcctatcaggaaggt
ggaggtctctatgcattgggtctcattcatgccaatcatggtggtgacataattgactat
ctccttaatcagctcaagaatgccagcaatgatatcgttagacatggaggcagcttgggc
cttggtttggctgcaatgggaactgcacgtcaggatgtatatgatttgctgaaaacaaac
ctgtatcaggatgatgctgtgacaggggaggcagctggcctggccttaggtttggttatg
ttaggctctaaaaacgcccaggcgattgaggatatggttggctatgcacaagaaactcaa
cacgagaagattctgcgtggtctagcagttggcattgcgttagtgatgtatgggaggatg
gaggaggccgatgctctcattgaatctctctgtcgtgataaggacccaattcttagaaga
tctggaatgtatactgtagccatggcttattgtggctctggtaacaataaagctattcga
cgcctgctgcatgttgctgtaagtgatgtcaacgatgatgtcagaagagcagcagtagag
tctcttggcttcattttgttcaggacgcctgaacagtgtccaagtgtggtctctttgttg
tccgagagttataaccctcatgtgcgctacggcgctgcaatggccctgggagtctgctgt
gctggtacaggaaacaaggaagcaattaatttactggagccaatgaccaatgaccctgtg
aactacgtgcggcaaggggctctgatagcctcagctctcatcatgatccaacagaccgaa
atcacgtgtccaaaggtaaaccagttccggcagctgtattccaaagtcatcaatgacaag
catgatgatgtcatggccaaatttggcgctattctggcccaaggcatactggatgcaggt
ggtcataatgtcacaatctccttacagtccaggactgggcacactcatatgccttctgtg
gttggcgtccttgtctttacccagttctggttctggtttcccctttcacacttcctatca
ttggcttatactcctacctgtgtcatcggccttaacaaggatttaaagatgccgaaagtt
caatataaatcaaattgtaaaccatccacattcgcataccctgcccctctggaagttcca
aaagaaaaagaaaaggaaaaggtttccaccgctgtgttgtctattactgccaaagctaaa
aaaaaagaaaaagaaaaagaaaaaaaggaggaggagaagatggaagtggacgaagcagaa
aagaaggaagagaaagagaagaaaaaagaaccggaaccaaacttccagctgttggataat
ccagcacgggtcatgcctgcccagctgaaggtcttaagtatgacagagacctgcagatac
caacccttcaagccactctccatcgggggcatcataattctgaaagacaccagcgaagac
attgaggaacttgtggaacccgtggcagcacatggcccaaagattgaagaggaggagcag
gagccagagcccccagagccatttgagtacatcgatgactag
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