Rattus norvegicus (rat): 83810
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Entry
83810 CDS
T01003
Symbol
Trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04080
Neuroactive ligand-receptor interaction
rno04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
83810 (Trpv1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
83810 (Trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
83810 (Trpv1)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
83810 (Trpv1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
83810
NCBI-ProteinID:
NP_114188
RGD:
628841
Ensembl:
ENSRNOG00000019486
UniProt:
O35433
A6HGJ0
Structure
PDB
PDBj
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All DBs
Position
10:58349936..58375021
Genome browser
AA seq
838 aa
AA seq
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MEQRASLDSEESESPPQENSCLDPPDRDPNCKPPPVKPHIFTTRSRTRLFGKGDSEEASP
LDCPYEEGGLASCPIITVSSVLTIQRPGDGPASVRPSSQDSVSAGEKPPRLYDRRSIFDA
VAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVA
RKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTK
GRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVD
NTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEP
ECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNR
LLQDKWDRFVKRIFYFNFFVYCLYMIIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEIL
SVSGGVYFFFRGIQYFLQRRPSLKSLFVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVAS
MVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIE
DGKNNSLPMESTPHKCRGSACKPGNSYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFI
ILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKAF
RSGKLLQVGFTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGVKRTLSFSLRSG
RVSGRNWKNFALVPLLRDASTRDRHATQQEEVQLKHYTGSLKPEDAEVFKDSMVPGEK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacgggctagcttagactcagaggagtctgagtccccaccccaagagaactcc
tgcctggaccctccagacagagaccctaactgcaagccacctccagtcaagccccacatc
ttcactaccaggagtcgtacccggctttttgggaagggtgactcggaggaggcctctccc
ctggactgcccttatgaggaaggcgggctggcttcctgccctatcatcactgtcagctct
gttctaactatccagaggcctggggatggacctgccagtgtcaggccgtcatcccaggac
tccgtctccgctggtgagaagcccccgaggctctatgatcgcaggagcatcttcgatgct
gtggctcagagtaactgccaggagctggagagcctgctgcccttcctgcagaggagcaag
aagcgcctgactgacagcgagttcaaagacccagagacaggaaagacctgtctgctaaaa
gccatgctcaatctgcacaatgggcagaatgacaccatcgctctgctcctggacgttgcc
cggaagacagacagcctgaagcagtttgtcaatgccagctacacagacagctactacaag
ggccagacagcactgcacattgccattgaacggcggaacatgacgctggtgaccctcttg
gtggagaatggagcagatgtccaggctgcggctaacggggacttcttcaagaaaaccaaa
gggaggcctggcttctactttggtgagctgcccctgtccctggctgcgtgcaccaaccag
ctggccattgtgaagttcctgctgcagaactcctggcagcctgcagacatcagcgcccgg
gactcagtgggcaacacggtgcttcatgccctggtggaggtggcagataacacagttgac
aacaccaagttcgtgacaagcatgtacaacgagatcttgatcctgggggccaaactccac
cccacgctgaagctggaagagatcaccaacaggaaggggctcacgccactggctctggct
gctagcagtgggaagatcggggtcttggcctacattctccagagggagatccatgaaccc
gagtgccgacacctatccaggaagttcaccgaatgggcctatgggccagtgcactcctcc
ctttatgacctgtcctgcattgacacctgtgaaaagaactcggttctggaggtgatcgct
tacagcagcagtgagacccctaaccgtcatgacatgcttctcgtggaacccttgaaccga
ctcctacaggacaagtgggacagatttgtcaagcgcatcttctacttcaacttcttcgtc
tactgcttgtatatgatcatcttcaccgcggctgcctactatcggcctgtggaaggcttg
cccccctataagctgaaaaacaccgttggggactatttccgagtcaccggagagatcttg
tctgtgtcaggaggagtctacttcttcttccgagggattcaatatttcctgcagaggcga
ccatccctcaagagtttgtttgtggacagctacagtgagatacttttctttgtacagtcg
ctgttcatgctggtgtctgtggtactgtacttcagccaacgcaaggagtatgtggcttcc
atggtgttctccctggccatgggctggaccaacatgctctactatacccgaggattccag
cagatgggcatctatgctgtcatgattgagaagatgatcctcagagacctgtgccggttt
atgttcgtctacctcgtgttcttgtttggattttccacagctgtggtgacactgattgag
gatgggaagaataactctctgcctatggagtccacaccacacaagtgccgggggtctgcc
tgcaagccaggtaactcttacaacagcctgtattccacatgtctggagctgttcaagttc
accatcggcatgggcgacctggagttcactgagaactacgacttcaaggctgtcttcatc
atcctgttactggcctatgtgattctcacctacatccttctgctcaacatgctcattgct
ctcatgggtgagaccgtcaacaagattgcacaagagagcaagaacatctggaagctgcag
agagccatcaccatcctggatacagagaagagcttcctgaagtgcatgaggaaggccttc
cgctctggcaagctgctgcaggtggggttcactcctgacggcaaggatgactaccggtgg
tgtttcagggtggacgaggtaaactggactacctggaacaccaatgtgggtatcatcaac
gaggacccaggcaactgtgagggcgtcaagcgcaccctgagcttctccctgaggtcaggc
cgagtttcagggagaaactggaagaactttgccctggttccccttctgagggatgcaagc
actcgagatagacatgccacccagcaggaagaagttcaactgaagcattatacgggatcc
cttaagccagaggatgctgaggttttcaaggattccatggtcccaggggagaaataa
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