Rattus norvegicus (rat): 83833
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Entry
83833 CDS
T01003
Symbol
Smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03082
ATP-dependent chromatin remodeling
rno04714
Thermogenesis
rno05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
83833 (Smarcd2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
83833 (Smarcd2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
83833 (Smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
83833 (Smarcd2)
03036 Chromosome and associated proteins [BR:
rno03036
]
83833 (Smarcd2)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
83833 (Smarcd2)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
83833 (Smarcd2)
PBAF complex
83833 (Smarcd2)
GBAF(ncBAF) complex
83833 (Smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
83833
NCBI-ProteinID:
NP_114189
RGD:
69289
Ensembl:
ENSRNOG00000010557
UniProt:
O54772
A6HK23
LinkDB
All DBs
Position
10:complement(91693542..91702408)
Genome browser
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPNPALRGPGPSGGMGVPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKADGDNSGTAGTPGGTPAADKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcccccgctgagccccggcggcggcgcc
gttgccgcggccctcggtgcgccgcctccgcctgcgggacccggaatgctgcccaacccg
gcgctcaggggcccggggccttctggaggcatgggggtaccgggggccgctgccttccgc
cccatgggccccgcgggccccgcggcgcagtaccagcgacctggcatgtccccaggaagt
aggatgcccatggctggcttgcaggtgggacctccggctggttccccatttggcacagct
gctccacttcgacctggcatgccacctaccatgatggatccattccgaaaacgcctgctt
gtgcctcaggcccagcccccgatgcctgcccagcgccgagggttaaagaggaggaagatg
gcagataaggttctacctcagcgaatccgggagcttgtcccagagtctcaggcatacatg
gatcttttagctttcgagaggaagctggaccagaccatcgctcgcaagcggatggagatc
caagaggccatcaagaagcctctgacgcaaaagcgaaaacttcggatctatatttccaat
acattcagtcccagcaaggcagatggtgataattcaggaactgcagggacccctggggga
accccagcagcagacaaggtggcctcctgggagcttcgagtagagggaaaacttctggat
gatcctagcaaacagaagaggaagttctcctcattctttaagagccttgttatcgagttg
gacaaggagctgtatgggcctgacaaccatctggtggagtggcatcggatgcccaccact
caggaaacagatggctttcaggtgaaacggccaggagatctcaatgtcaagtgcaccctt
ctgctcatgctggatcatcagccacctcagtataaactggacccccgcctggcgaggttg
ctgggagtgcacacacagacgagagctgccatcatgcaggcgctgtggctttacatcaaa
cacaaccagctgcaggatgggcatgagcgggagtacatcaactgcaaccgctacttccgc
cagatcttcagctgtggccggctccgtttctccgagatccccatgaagctggctgggctg
ctgcagcatccagaccccattgttattaaccatgtcattagcgtggaccctaatgaccag
aagaagacagcctgttatgacatcgacgtagaggttgatgaccccctgaaggcccagatg
agtaacttcctggcctctaccaccaaccagcaggagattgcctctcttgatgtcaagatc
catgagaccattgagtccatcaaccagctgaagacccagagggacttcatgctcagcttc
agcaccgagccccaggacttcatccaggaatggctccgctcccaacgccgagacctcaag
atcatcacagatgtgattggaaaccctgaggaggagagacgagctgctttctaccaccag
ccctgggctcaggaagcagttgggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaattcgcctgacctaa
DBGET
integrated database retrieval system
