Rattus norvegicus (rat): 84008
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Entry
84008 CDS
T01003
Symbol
Cntnap1
Name
(RefSeq) contactin-associated protein 1 precursor
KO
K07379
contactin associated protein 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
84008 (Cntnap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
84008 (Cntnap1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
84008 (Cntnap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
EGF
Motif
Other DBs
NCBI-GeneID:
84008
NCBI-ProteinID:
NP_114450
RGD:
70902
Ensembl:
ENSRNOG00000020277
UniProt:
P97846
LinkDB
All DBs
Position
10:86610140..86625896
Genome browser
AA seq
1381 aa
AA seq
DB search
MMSLRLFSILLAAVVSGAQGWGYYGCNEELVGPLYARSLGASSYYGLFTTARFARLHGIS
GWSPRIGDPNPWLQIDLMKKHRIRAVATQGAFNSWDWVTRYMLLYGDRVDSWTPFYQQGH
NATFFGNVNDSAVVRHDLHYHFTARYIRIVPLAWNPRGKIGLRLGIYGCPYTSNILYFDG
DDAISYRFQRGASQSLWDVFAFSFKTEEKDGLLLHTEGSQGDYVTLELQGAHLLLHMSLG
SSPIQPRPGHTTVSAGGVLNDLSWHYVRVDRYGREANLTLDGYVHRFVLNGDFERLNLEN
EIFIGGLVGAARKNLAYRHNFRGCIENVIYNRINIAEMAVQRHSRITFEGNVAFRCLDPV
PHPINFGGPHNFVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELMLSEGQV
NVSIAQTGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTG
TSYFFGGCPKPASRWGCHSNQTAFHGCMELLKVDGQLVNLTLVEFRKLGYFAEVLFDTCG
ITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGVTCHEPLYKESCEAYRLSGKYSGNYT
IDPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMDRPFLGAIQYWNASWEEV
SALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGL
DQSCIDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSSSEAQFFLRPLRCY
GDRNSWNTISFRTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPFCQWRRPYVR
VELNTSRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLR
PMPLQTYIWLEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTFPNCTG
HCTHPRFPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFETGTWMRYNLQSALRS
AAQEFSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNV
TGEEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVT
DGQPHSVNITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQ
RYNTPGFSGCLSGVRFNNVAPLKTHFRTPRPMTAELAEAMRVQGELSESNCGAMPRLVSE
VPPELDPWYLPPDFPYYHDDGWIAILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNE
PKATHDSHPGGKAPLPPSGPAQAPAPTPAPTQVPTPAPAPASGPGPRDQNLPQILEESRS
E
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtctccggcttttcagcattctgctcgccgctgtggtctctggagcccagggc
tggggctactatggctgcaatgaggagctggtggggcctctgtatgcacggtctctgggt
gcttcctcctactatggactctttaccacagcccgctttgcccggctacacggcatcagt
ggatggtcgccccggattggggacccgaatccctggctccagatagacttaatgaagaag
catcgaatccgggctgtggccacacagggagcctttaattcttgggattgggtcacacgt
tacatgctgctctacggggaccgtgtggacagctggacaccattctaccaacaagggcac
aacgcgaccttcttcggtaatgtcaacgactcggcggtggtacgccatgacctgcactac
cattttacggctcgctacatccgcatcgtgccactggcctggaacccccgcggcaagatt
ggcttgaggctgggcatctacggttgtccctacacgtccaacatcctgtattttgacggc
gatgatgccatttcataccgcttccagcgaggggccagtcaaagtctttgggacgtgttc
gcttttagtttcaagacagaggagaaggacgggctgctgttgcacaccgaaggctcccag
ggggattatgtgacgcttgaactgcaaggagcacacctgctgctgcacatgagcctgggc
agcagccccatccagccgagacctggtcacaccacggtgagcgctggtggcgtacttaat
gacctaagctggcattatgtgcgggtggaccgatacggccgagaagcaaatctcaccctg
gatggttacgtacatcgctttgtgctcaacggcgactttgaaaggctgaatctcgaaaat
gagatattcatcggaggtctagtgggcgcagcgcgtaagaacctggcctaccgccataac
ttccgtggctgtatagaaaacgtgatctacaaccggatcaacatagctgaaatggcagtg
cagcgccattcgcggatcaccttcgagggtaatgtggctttccggtgcttggatcccgtt
ccacaccccatcaacttcggaggccctcacaacttcgtccaagtgcctggctttccacgt
cgaggccgccttgctgtctccttccgcttccgcacctgggacctcacagggctgctcctt
ttctcccgcttgggggatgggctgggtcatgtggagctgatgcttagtgaagggcaagtc
aatgtatccatcgcgcagactggccgcaagaagcttcagtttgctgcggggtaccgcctg
aatgatggcttctggcatgaggtgaactttgtggcacaggaaaaccatgcggtcatcagt
attgatgatgtggagggggcagaggtcagggtatcatacccactgctgatccgcacaggg
acttcatacttctttggtggttgtcccaaaccagccagtcgatggggctgccactccaac
cagacagcattccatggctgcatggagctgctcaaggtggatggtcaactggtcaacctc
actctggtagagtttcggaagcttggttactttgctgaggtcctctttgacacatgtggc
atcacagacagatgcagccctaatatgtgtgagcatgatgggcgctgctaccagtcttgg
gatgacttcatctgctactgcgaactcaccggctacaagggagttacctgccatgaacca
ttgtataaggagtcctgtgaagcctatcgcctcagcgggaaatattctggaaattacacc
attgatcctgatggcagtggacccctgaaaccatttgtagtgtattgtgatatccgagag
aaccgagcatggacagttgtgcgacatgacaggctatggaccactcgagtgacaggttcc
agcatggaccggccctttctgggggccatccaatactggaatgcctcctgggaggaagtc
agtgctctggccaatgcttcccagcactgtgagcagtggatcgagttctcctgctacaat
tcccggctgctcaacactgcaggaggctacccctacagcttttggattggccgaaatgaa
gaacagcatttctactggggaggctcccagcctgggatccaacgctgtgcctgtgggctg
gaccagagctgtatagaccctgcactgcactgcaactgcgatgctgaccagccacagtgg
agaacagacaaggggctcctgacctttgtggaccatctgcctgtcactcaggtagtgata
ggtgacacaaaccgctccagctctgaagctcagttcttcctgaggcctctgcgctgttat
ggtgaccgcaattcctggaacactatctccttccgcactggagctgcactgcgtttccct
ccaatccgtgccaaccacagccttgatgtctccttctacttcaggacctcggctccctca
ggagtcttcctagagaacatggggggtcctttctgccagtggcgccgaccttacgtgaga
gtggagctcaacacatcccgggatgtggtctttgcctttgatattggcaatggggatgag
aacctgacagtgcactcagatgacttcgagttcaatgatgacgagtggcatttggtccgg
gctgaaatcaacgtgaagcaggcccggctgcgagtggaccatcggccctgggtgctaagg
cccatgcccctgcagacgtacatctggctggagtatgaccaacccctctatgtgggatct
gcagagcttaagaggcgcccatttgtggggtgcttgagggccatgcgtttgaatggagtg
actctgaacttggagggtcgtgccaatgcctccgagggcaccttccccaactgcacgggc
cactgcacccacccccggttcccctgtttccacggaggacgctgtgtggagcgatacagc
tactacacgtgtgactgtgacctcacagcttttgatggaccatattgtaatcacgatatt
ggtggattctttgagactggcacatggatgcgctataacctccagtcagcactgcgttct
gcggcccaggagttctctcacatgctgagccggccggtaccgggctatgagcctggctat
atcccaggctacgacactcctggttacgtgcctgggtaccatggtcctgggtaccgccta
cccgactacccaaggcctggccggccagtgcccggataccgggggcccgtgtacaatgtt
actggagaggaggtctcctttagcttcagcaccagctctgctcctgcagtcctgctctac
gtcagctcctttgtgcgtgactacatggccgtgctcatcaaggaagatgggaccctacag
cttcgctatcagctgggcaccagtccctatgtgtaccagctaaccacccggccagtgacc
gatggccaaccccatagtgtcaacatcacccgggtctaccgaaacctctttatccaggtg
gactacttcccgctgacagaacagaagttctctctcctggtggacagccagctggactcc
cccaaggccttgtatctagggcgtgtgatggagacaggagtcattgacccagagattcag
cggtacaacaccccaggtttctcaggctgcctgtctggtgtccggttcaacaatgtggct
cctctcaagacccatttccgaacccctcgccccatgactgctgagctggcggaggccatg
cgggttcaaggagaactgtcggagtctaactgtggcgctatgccacgccttgtctccgag
gtgccaccagagcttgatccctggtacctgcccccagatttcccatactaccatgacgac
ggatggattgccatactcttaggttttttggtggccttcctgctgctggggcttgtggga
atgctggtgctgttctatctgcaaaatcatcgatacaagggctcctatcacaccaacgag
cccaaggccacccatgattcccaccctggcggcaaagctcccctacctccctcaggccct
gcccaggcccctgcccccactccagctcccacccaggttccgaccccagccccagcccca
gcctctggcccaggccccagggaccagaacctcccccagatcttggaggagtccaggtct
gaatga
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