Rattus norvegicus (rat): 84012
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Entry
84012 CDS
T01003
Symbol
Slc1a6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04082
Neuroactive ligand signaling
rno04721
Synaptic vesicle cycle
rno04724
Glutamatergic synapse
rno05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
84012 (Slc1a6)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
84012 (Slc1a6)
04721 Synaptic vesicle cycle
84012 (Slc1a6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
84012 (Slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
84012 (Slc1a6)
Transporters [BR:
rno02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
84012 (Slc1a6)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
84012
NCBI-ProteinID:
NP_114454
RGD:
620340
Ensembl:
ENSRNOG00000007509
UniProt:
O35921
Q7TSX6
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All DBs
Position
7:complement(11492422..11521007)
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AA seq
561 aa
AA seq
DB search
MSSHGNSLFLRESGAGGGCLQGLQDSLQQRALRTRLRLQTMTREHVRRFLRRNAFILLTV
SAVIIGVSLAFALRPYQLSYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLDNKA
TGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIETVPTADAFMDLVR
NMFPPNLVEACFKQFKTQYSTRVVTRTIVRTDNGSELGASISPPSSAENETSILENVTRA
LGTLQEVISFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLNEAI
MRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPLIYF
LVTHRNPFPFIGGILQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGATVN
MDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVLTSV
GLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLGKPY
KSLMAQEKGASRGRGGNESVM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccacggcaacagtctgttcctgagggagagcggcgctggcgggggctgtctg
caaggcctgcaggacagtctgcagcagagagcactgcgcacgcgcttgcgcctgcagacc
atgacccgagagcacgtgcggcgcttcctgcgccgaaatgccttcatcttgctcacagtc
agcgctgtgatcattggcgtcagcctggcatttgccttgcgcccataccagctctcctac
cgccagatcaagtacttctcttttcctggtgagctgctcatgaggatgctgcagatgctg
gtgctacccctcattgtctccagccttgtcacaggtatggcatccttggacaacaaggca
acagggaggatgggaatgagggcagctgtgtactacatggtgacgaccgtcattgcagtt
ttcatcggcatcctaatggttaccatcatacatcctgggaagggctccaaggaggggctg
caccgtgagggccgaattgagactgttccaacagctgatgctttcatggacctggtcaga
aatatgtttccaccaaaccttgtggaggcctgcttcaaacagtttaaaacacagtacagc
acacgagtggtaacaaggacgattgtaaggacagacaacgggtcagagttgggggcctcc
atttctcctccatcctcagcagaaaatgaaaccagcatcctggaaaatgtcacccgggcc
ttgggcaccctgcaggaggtgataagctttgaggagactgtgcctgtacctggctcagct
aatggcatcaacgctttgggcctcgtggtcttctctgtggccttcgggctggtcatcggt
ggcatgaagcacaaaggccgtgtcctgagggatttcttcgacagcctcaatgaggctatt
atgaggctggtgggcatcatcatctggtatgcaccagtgggcatcctgttcctgattgct
ggaaagattctggaaatggaagacatggctgtccttggaggtcagctgggcatgtacacg
ctgactgtcattgtcggcttatttcttcatgctggtggtgtgttacccctcatctacttc
cttgtcacacatcggaacccctttcccttcatcggtggtatactacaggcactcatcaca
gccatgggtacctcttccagctctgcaactctgcctatcactttccgatgcctggaggag
ggcctgggtgtggaccgccgcatcaccagattcgtgttgcctgtgggggccactgtcaac
atggacggcaccgcgctctatgaggccttggcagccatctttattgctcaagtcaacaac
tatgagctgaaccttggtcagatcaccacaatcagcatcacagccacagctgccagcgta
ggagcagctggcatcccccaggcaggactggttaccatggtgattgtgctcacatccgtc
ggcctgcccacagaggacatcacattgatcatagctgtggattggttccttgatcgactt
cgtacgatgaccaatgtacttggggactcaattggagcagctgtcattgagcatttgtcc
caacgggagctggagctgcaagaggctgagctgactctacccagcctggggaaaccctat
aagtcactcatggcacaagaaaagggggcatcaaggggtcggggaggtaatgagagtgtc
atgtga
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