Rattus norvegicus (rat): 84018
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Entry
84018 CDS
T01003
Symbol
Synj2
Name
(RefSeq) synaptojanin-2 isoform 1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00562
Inositol phosphate metabolism
rno01100
Metabolic pathways
rno04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
84018 (Synj2)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
84018 (Synj2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
84018 (Synj2)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
84018 (Synj2)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
84018 (Synj2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
84018
NCBI-ProteinID:
NP_001106842
RGD:
69436
Ensembl:
ENSRNOG00000017114
UniProt:
O55207
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All DBs
Position
1:48923742..49027153
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AA seq
1496 aa
AA seq
DB search
MALSKGLRLLARLDPTGPSSVLLEARGRGDCLLFEAGAVATLAPEEKEVIKGLYGKPTDA
YGCLGELSLKSGGVPLSFLVLVTGCTSVGRIPDAEIYKITGTEFYPLQEEAKEEDRLPAL
KKILSSGVFYFAWPNDGACFDLTIRAQKQGDDCSEWGTSFFWNQLLHVPLRQHQVNCHDW
LLKVICGVVTIRTVYASHKQAKACLISRISCERAGARFLTRGVNDDGHVSNFVETEQAIY
MDDGVSSFVQIRGSVPLFWEQPGLQVGSHHLRLHRGLEANAPAFERHMVLLKEQYGQQVV
VNLLGSRGGEEVLNRAFKKLLWASCHAGDTPMINFDFHQFAKGRKLEKLENLLRPQLKLH
WDDFGVFAKGENVSPRFQKGTLRMNCLDCLDRTNTVQCFIALEVLHLQLESLGLNSKPIT
DRFVESFKAMWSLNGHGLSKVFTGSRALEGKAKVGKLKDGARSMSRTIQSNFFDGVKQEA
IKLLLVGDVYNEESTDKGRMLLDNTALLGLGSNKQNSLSGMLDGKATPRILKAMTERQSE
FTNFKRIQIAMGTWNVNGGKQFRSNLLGTTELTDWLLDAPQLSGAVDSQDDGGPADIFAV
GFEEMVELSAGNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHV
PFIRDVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREI
THKLSFPSGRNIFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSG
KIFKDFHEGTINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLL
DSDLDGDANIRHTWSPGTLKYYGRAELQASDHRPVLAIVEVEVQEVDVGARERVFQEVSS
VQGPLDATVIVNLQSPTLEERNEFPEDLRTELMQTLGNYGTIILVRINQGQMLVTFADSH
SALSVLDVDGMKVKGRAVKIRPKTKDWLEGLREELIRKRDSMAPVSPTANSCLLEENFDF
TSLDYESEGDVLEDDEDYLADEFGQPVVSDSELGGDDSSDTMSASTPASKSPALAKKKQH
PTYKDDADLMTLKLELEVAGNFRHRSPSRSLSVPNRPRPPHPPQRPPPPTGLMVKKSASD
ASISSGTHGQYSILQTAKLLPGAPQQPPKARTGISKPYNVKQIKTTNAQEAEAAIRCLLE
AGGGVPESAPGATPLRNQGSSKPEASLGPPVLPRRPVPRVPTMKKPTLRRTGKPMLSEEQ
CEQQPVHFTMASQEMNLETPPPITAPIPPVPKPRTFQPGRGVERRPSGGKPEPDDAPPVT
GAVELSSPEAPEAPSLAPKVPPRRKKSAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPD
TPLLYPQMALGTSSAISPETDGPRVTEPEAASFHGDYPDPFWSLLHHPKLLNNNTWLSKS
SEPLDLGSRTPERTHTDSAQVNASVVERGLPPDHGGKDFSHWMAASNKDKRTTLGV
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagcaaagggctgcgactgctggcgcggctggaccccaccggcccgagcagc
gtgctgctggaggcgcggggccgcggcgactgtctactctttgaggccggcgcggtggcc
acgctggctccggaagagaaggaagtcattaaaggactgtatgggaagccgacggatgcc
tatggctgcctcggggagctgagtttaaaatccggtggcgtccccttgagctttctggtg
ttggtgacaggctgcacgtcagtgggcagaattccagatgcagagatctacaaaatcact
ggcactgagttttaccccctgcaggaagaggccaaggaagaggaccgcctgccagccttg
aagaaaatcctgagttcaggggtgttctatttcgcatggcccaatgatggcgcctgcttc
gatctgaccatcagggctcagaaacagggtgatgactgctctgaatgggggacctccttc
ttctggaaccagctattgcatgtgcctctgcggcagcaccaggtgaactgtcatgactgg
ttgctgaaagtcatctgtggggtggtgaccatccgcacggtttatgcctcccacaagcag
gccaaggcctgtctcatctctcgcatcagctgtgaacgcgcaggtgctcgcttcctcacc
cggggtgtgaacgacgatggccacgtgtccaactttgtggagacagagcaggcgatttac
atggatgatggagtgtcgtcctttgtccagatccgaggctccgttccgctgttctgggag
cagccagggctccaggttggctcccatcatctgagactgcacagaggcctagaggccaac
gcccctgcttttgaaaggcacatggtgcttctgaaggagcagtacgggcagcaggtggtg
gtgaacctgctgggaagcagaggcggtgaggaggtgctcaacagagccttcaagaagttg
ctctgggcttcttgccacgcaggcgacacgcctatgataaattttgacttccatcagttt
gccaaaggtaggaagctagagaaattggagaacctgttgagacctcagttaaaactacac
tgggatgactttggcgtatttgcgaagggcgagaatgtaagtccacggtttcagaaaggc
actctgcggatgaactgtctcgactgtctggacagaaccaacactgtacagtgcttcatt
gctcttgaggtgcttcatctgcagcttgagagcctagggctgaattccaagcccatcact
gaccgcttcgtggagtccttcaaagccatgtggtctctgaatgggcatggcctgagcaag
gtgttcacagggagcagggccctggaaggaaaggccaaggtggggaagctgaaggatggg
gctagatccatgtctcgtaccatccagtccaacttcttcgacggggtgaagcaggaggcc
atcaagctactgctagttggagatgtctacaatgaagagtctacagacaaaggcaggatg
ctgctggacaacacggcccttctgggtttggggtcaaataaacaaaacagtctttcaggc
atgctggatggaaaagcaacacccaggatcctgaaggccatgacagaacgccagtcagaa
ttcacaaatttcaagcggatccagattgctatggggacctggaatgtgaacggaggaaaa
caattccgtagcaatctcctggggaccactgaactcactgactggctcctggatgcaccc
cagctctcaggagcagtggactctcaggacgatggcggtcccgctgacatatttgccgtc
gggtttgaggagatggtggagctgagtgcaggaaatattgtcaatgccagcaccaccaac
aggaagatgtggggtgagcagctccagaaagccatctcccgatcccatcggtacatcctc
ttgacctcagcacagctggtgggcgtctgtctttacatctttgtacgtccgtaccacgtc
ccgttcatcagggatgtggccatcgacaccgtgaagaccggtatggggggaaaggcaggg
aataagggcgccgtgggtatccgctttcagttccacagcactagcttctgcttcatctgc
agtcacctgacggctgggcagtctcaggtgaaggagaggaacgaagactaccgggagatc
acgcacaagctctccttcccttcggggagaaacatattttcacacgattatgtgttttgg
tgtggcgatttcaactaccgcatcgatcttacttacgaagaagtcttctattttgttaaa
cgccaagactggaagaaacttatggaatttgatcagttacagctacagaaatcaagtggg
aaaatttttaaagactttcatgaaggaaccattaacttcggacccacctacaagtatgac
gttggatcggctgcctatgacacaagtgacaagtgccggaccccagcctggacagacagg
gtgctgtggtggaggaagaagcatccgtacgataagacagctggcgaactcaaccttcta
gacagtgatctagacggtgatgccaacatcagacatacctggtctccgggcactctcaag
tactacggccgtgccgagctgcaggcatctgatcacagacctgtgctggccatcgtagag
gtggaggttcaagaggtcgatgtgggagcccgggagagagtcttccaggaagtgtcctct
gtccaaggcccgctggacgccactgttattgtaaaccttcagtctccaacccttgaagag
agaaatgaatttccagaggacctgcgcacagaacttatgcagactttggggaattatggg
acgattattctggtcaggatcaaccaagggcagatgctggtgacatttgcagacagccac
tcagctctcagtgtgctggatgtggatggtatgaaggtgaaaggcagggccgtgaagatt
cgaccaaagaccaaagattggctagaaggcttgagagaggagctcattcggaagcgggac
agcatggcccctgtgtctcccaccgccaactcctgcttgttggaggagaactttgacttc
acaagtctggactatgagtcagaaggggatgttcttgaagatgatgaagactacttagcg
gatgagtttggtcagcctgtagtctcagacagtgagcttggaggagacgactcttctgat
accatgagcgcctcgacacctgccagcaagtctcccgcactggctaaaaagaagcaacat
ccaacgtacaaagacgacgctgacctgatgacgttaaagctggagctggaagttgctggg
aattttcgccaccgttctccgagcaggtccctgtctgtccccaataggcctcggccacct
caccctccacaaagacccccccctccaactggcttaatggtgaagaagtctgcctcagat
gcgtctatctcctccggaacccacgggcaatattccatcttgcagaccgcgaaacttctt
ccaggagcacctcagcaaccgcccaaggctcgaactggaataagtaaaccttacaacgtc
aaacagatcaaaaccaccaatgctcaggaggcggaagcagctatccggtgtctcctggaa
gctggcggaggtgtcccagagtcagccccgggtgccacgcccctgagaaaccaagggtct
tctaagccagaggcctccctggggcctccagtcctaccgcgccggcctgttccaagggtt
cccactatgaagaaaccaactttgaggagaacaggaaagcccatgttatcagaagaacag
tgtgaacagcagcctgtccattttacaatggcttcccaggaaatgaaccttgagacccct
cctccaataacagctcccatcccgcctgttcccaaaccaagaacatttcagcctgggaga
ggtgttgagaggaggccgagtggtggcaagccagaaccggatgacgctcctcctgtgaca
ggcgctgtggagttatcgtctccagaggccccagaggccccgtccctggctcccaaggtg
cctcctaggaggaagaagtctgcaccagcagccttccacctgcaggtcctgcagagcaac
agccaacttctgcagggcctcacatgctccagcagttctccgtccccaccaaagcctgac
acccccctgctctatccgcaaatggcacttggcacttcatctgctataagtcccgaaact
gatggccccagagtgacggagcccgaggcagcctcttttcatggcgattacccagatccc
ttctggagccttctccaccaccccaagctgttgaataataatacctggctgtccaagagc
tctgagcctttagacttggggtccaggacccctgagaggacacacacagactcagcgcag
gtcaatgcatcagtggttgagagggggcttccaccagaccatgggggtaaagacttcagt
cactggatggccgccagtaacaaagacaagaggacaacattaggcgtttga
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integrated database retrieval system