Rattus norvegicus (rat): 84479
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Entry
84479 CDS
T01003
Symbol
Synrg
Name
(RefSeq) synergin gamma
KO
K25219
synergin gamma
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
84479 (Synrg)
Membrane trafficking [BR:
rno04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
84479 (Synrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
84479
NCBI-ProteinID:
NP_445871
RGD:
620684
Ensembl:
ENSRNOG00000053814
UniProt:
Q9JKC9
LinkDB
All DBs
Position
10:69346154..69428714
Genome browser
AA seq
1329 aa
AA seq
DB search
MALRPGAGASGAAGAGTGPGGAGSFMFPVAGGMRPPQGLIPMQQQGFPMVSVMQPNMQGM
MGMNYSSQMSQGPIAMQAGIPMGPMPAAGVPFLGQPPFLGMRPAAPQYTPDMQKQFAEEQ
QKRFEQQQKLLEEERKRRQFEEQKQKLRLLSSVKPKTGEKNRDDALEAIKGNLDGFSRDA
KMHPTPASHPKKPDCPTSSHSTKTVSPSSAFLGEDEFSGFMQGPVELPTCGPSSTAQPFQ
SFLPSTPLGQLHTQKAGAQPLPPGQAPVSFAVHGVHGQIPCLSAASASHSVQKAGPSLEE
KLLVSCDISASGQEHIKLSSPEAGHRAVVPGSSKNSPGLMAHNGGAVDGCVSGPTTAVAE
KTSDQNLSKEESGVGVFPSQDPVQPRMPPWIYNESLVPDAYKKILETTMTPTGIDTAKLY
PILMSSGLPRETLGQIWALANRTTPGKLTKEELYTVLAMVAVTQRGVPAMSPDTLNQFPA
APIPTLSGFPMTLPTPVSQPTAMTSGPAGSIPLSLGQPIMGINLVGPVGGAAAPTSSGFM
PAYPSNQVGKTEEDDFQDFQDASKSGSIDDSFTDFQEVPASSKTSNSQHGNSAPSLLIPL
PGTKASTDKYAVFKGISAEKPSENPASFGESGDKYSAFRELEPTADSKPLGESFAEFRST
GTDDGFTDFKTADSVSPLEPPTKDSFPSAFASGAAQQTQTQVKTPLNLADLDMFSSVDCS
GEKPVPFSAAFSTSKSVSSRPQPAGSAAAPASLASTKASSLADDFGEFNLFGEYSNPASV
GEQDDFADFMAFGNSSIPSEPKADDKYEALREEGSPGALSTSTVEGAHNPPVSSSKYDVF
KQLSLEGAGLAIEEFKENTPSTKSDGDFADFHSSKFSSTSSDKSLGEKAVAFRHAKEDSA
SVKSLDLPSIGGSSVGKEDSEDALSVQFDMKLADVGGDLKHVMSDSSLDLPTVSGQHPPA
AGSALASEDALPETPFPAFASFKDMMPQTTEQKEYETGDFQDFTRQDMPMVDRSQENTCP
SPASSVASHETPKEGADDFGEFQSEKPKISKFDFLVANSQSKMKSSEEMIKSELATFDLS
VQGSHKRSLSLGDKEISRSSPSPALEQPFRDRSNTLSERAALPVIRDKYKDLTGEVEENE
RYAYEWQRCLGSALDVIKKANDTLNGISSSAVCTEVIQSAQGMEYLLGVVEVYRVTKRVE
LGIKATAVCSEKLQQLLKDIDKVWNNLIGFMSLTTLTPDENSLDFSSCMLRPGIKNAQEL
ACGVCLLNVDSRSRKEETPAEEQPKKAFNSETDSFKLAYGGHQYHASCANFWINCVEPKP
PGLLLPDLL
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggccgggagccggagccagcggcgcggcgggggcgggcacagggcccggc
ggggcaggcagcttcatgtttcctgtcgcaggtggcatgagaccccctcaaggcctgatt
ccaatgcagcagcaaggatttcctatggtctctgtcatgcagcccaatatgcaaggcatg
atgggaatgaattacagctctcagatgtcccagggacccattgcaatgcaggcaggaata
ccaatggggccaatgccagcagcgggtgtacctttcctgggtcagccaccttttctgggc
atgcgtcctgcagccccacagtacactccagacatgcagaagcagtttgcggaagagcaa
caaaaacgatttgaacaacaacaaaagctcttagaagaagaaagaaaacgacgtcagttt
gaagagcaaaaacaaaagctcagacttctgagtagcgtgaaacccaagacaggagagaag
aacagagacgacgctttggaagccatcaaaggaaacttggatgggttttccagagatgct
aagatgcaccccactcccgcatctcacccaaagaaaccagactgccccacatcatctcat
tctactaaaactgtctccccgtcatctgcctttcttggtgaagatgaattcagtggcttt
atgcaggggcctgttgagcttcccacttgtgggccttcttccacagcccagccctttcag
tctttcctccccagcaccccactcggccagttacacacacagaaggctggggcacagcct
ctacctccaggtcaggctccagtgtcttttgccgtacatggtgtccatgggcaaattcct
tgtttatctgctgcttcagcttcccacagtgtgcagaaagcaggcccttccttggaagag
aagctcctagtatcttgtgatataagtgcatctgggcaggaacacattaaattaagctct
cctgaagctgggcacagagccgtagtcccaggttccagtaagaactctcccggtttaatg
gcccataacgggggtgctgtagatggatgtgtgagtggtcccaccactgcagtcgcagaa
aagacttcagatcaaaacctgtcaaaggaagagagtggtgtgggcgtgtttccctctcag
gatcctgttcagcccagaatgcctccttggatttacaatgagagtttggttccagatgct
tataagaaaattttagaaaccacaatgactccaaccggaatagacactgctaaactttat
cccattctgatgtcatctggacttcccagggaaactcttggacagatatgggccttagct
aatcgaactacgcctggcaagctcactaaggaggagctttacaccgttctcgccatggta
gcagtaacacagagaggtgttcctgccatgagccctgatactttgaaccagttccctgcg
gctcccattcctaccttaagcggctttcctatgactctgcctaccccagtgagccagcca
acagcgatgacctctggccccgcaggctccatacccctcagccttggacagcccatcatg
ggcattaaccttgttggaccagtgggtggagctgcagcgccaacttccagtggcttcatg
ccagcctacccctcaaaccaggtgggaaagacagaagaagatgacttccaggattttcaa
gatgcttcgaagtcaggatccatcgatgattctttcactgacttccaagaggtgcctgcg
tcctcaaaaaccagtaattcccagcatggaaacagtgctccctcactcttgatcccactt
cctggaactaaagcctccacagacaaatatgcagtgtttaaagggatttctgctgagaag
ccctctgaaaaccctgcttcatttggagagtccggtgataaatacagtgctttcagggaa
ctcgagccaacagcagacagtaagcctttaggagagagctttgcggagttcagatccaca
ggaaccgatgacggcttcactgacttcaagactgctgatagtgtgtcacccctagagcca
ccaacaaaagactcttttccatcggcctttgcctcaggagctgcacagcagacacagaca
caggtgaaaactcctctgaacttagcagacctagatatgttctcctcagtggattgcagt
ggggagaaaccagtgcccttttcagctgcatttagcacctcaaagtcagtttcctcaaga
cctcagccggcgggttctgcagcagccccagcatcactggcatccactaaagcgtccagt
ttggcagatgattttggagagttcaacctctttggggaatattcgaaccctgcgtctgtt
ggggagcaggacgactttgcagatttcatggctttcggtaacagctccatcccctctgag
ccaaaagcagatgacaagtatgaagccctcagagaagaagggagccccggcgccttgtcc
accagcactgtggagggtgcacacaacccacctgtttcgtcatccaagtacgacgtcttc
aaacagctttccctagagggagctggactggccatcgaggagttcaaagagaacactcct
tccacaaagagtgacggtgactttgctgacttccactccagtaaattctcatccacgagc
tcagacaaatccctgggagagaaagcagtggctttcagacatgccaaagaagactccgcc
tcggtgaagtctttagacctcccctccatcggtggcagcagtgttggcaaggaggactct
gaagatgcgctttctgttcagtttgacatgaagttggctgatgtaggaggagatcttaag
catgtcatgtctgatagctctttggatttaccaacagttagtggccaacatcctcctgcc
gcaggatcagccttggccagtgaggacgctcttccagagactcccttcccagcttttgcc
agctttaaagacatgatgccccagaccactgagcagaaagagtatgaaactggggacttc
caggatttcacaaggcaggacatgcccatggtggaccggagccaagagaacacatgtccc
agcccagcttccagtgtggcctcgcacgaaacccccaaggagggtgcagacgactttgga
gaatttcaaagtgaaaagcccaaaatcagcaagtttgactttttagtagctaattcacag
agcaaaatgaagtctagtgaagaaatgatcaaaagtgagctggcaacctttgacctttct
gttcaaggatcacacaagaggagcttgagccttggggataaagaaataagcaggtcctct
ccttccccggccctggagcagcccttcagagaccggtccaacactctgagtgagagagct
gcactgcccgtcatccgagacaagtacaaggatctgactggcgaagtggaggaaaatgag
agatacgcgtatgagtggcagagatgcctggggagcgccctggatgtcattaagaaggca
aacgacaccttaaacggcattagcagcagtgctgtctgcacagaagttatccagtcagcc
caaggcatggagtatctcctaggcgtggtggaagtgtaccgagtaaccaagcgcgtggag
ctggggatcaaagccactgctgtgtgtagtgagaaactccagcagttgctgaaggacatc
gataaagtgtggaacaacttaatcggcttcatgtcacttaccacactcacgccagatgag
aattcactggatttttcctcctgtatgttacggcctgggatcaaaaacgcccaggagctg
gcttgtggagtgtgtctcctaaatgtggactccagaagccggaaagaagagacacctgca
gaagaacagcctaaaaaagcattcaactcagaaacagacagtttcaagctggcctatggg
ggacatcagtaccacgccagctgtgccaacttctggatcaactgtgttgaacccaagcct
cccggcctcctcttgccagatctgctctga
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