Rattus norvegicus (rat): 84511
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Entry
84511 CDS
T01003
Symbol
Slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04081
Hormone signaling
rno04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
84511 (Slco1c1)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
84511 (Slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
84511 (Slco1c1)
Transporters [BR:
rno02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
84511 (Slco1c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
84511
NCBI-ProteinID:
NP_445893
RGD:
628660
Ensembl:
ENSRNOG00000009740
UniProt:
Q9EPZ7
LinkDB
All DBs
Position
4:176197736..176244401
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AA seq
716 aa
AA seq
DB search
MDTSSKENAHLFHKNSAQPAGGPSFKAGYPSTEEARPCCGKLKVFLGALSFVYFAKALTE
GYLKSTITQIERRFDIPSSLVGIIDGSFEIGNLLVITFVSYFGAKLHRPKIIGAGCLVMG
FGTMLIAVPQFFMEKYSYEKYERYSPSSNLTPNISPCYLESSSPSPRSIVGKSQNKINDE
CEVDTSSSMWVYVFLGNLLRGLGETPIQPLGIAYLDDFASEDNAAFYIGCVQTVAIIGPI
FGFLLGSLCAKLYVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGFLSLLAAVPFWCLPK
TLPRSQSREDSGSSSEKSKFITDDPVNYQMAPREESMKIMEMARDFLPSLKSLFRNPVYI
LYLCASTVQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVALGIFSGGIVMKK
FRLGICEATKLYLGSSVFGYLLFLSLFALGCENSSVAGLTVSYQGTKPVSYHERALFSDC
NSRCKCSDSKWEPMCGDNGITYASACLAGCQSSSRSGKNIIFSNCTCVGFAAPKSGNWSG
MMGRCQKDNGCSQMFLYFLVISVITSYTLSLGGIPGYILLLRCIQPQLKSFALGIYTLAV
RVLAGIPAPVYFGVLIDTSCLKWGFKKCGSRGSCRLYDSHAFRHIYLGLTTLLGTVSVFL
STAVLLVLKKKYVSKRSSFITAREKIVMSSSVKKETCAARDHGLQPKYWPGKETRL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcatccaaagaaaatgcccatttgttccacaaaaattcagcgcaacctgcc
ggagggccatcttttaaagcgggatatccgtccacagaggaagcgcggccatgctgtgga
aaactcaaggtgttcttaggtgccctgtcttttgtttactttgccaaagcattgacagaa
ggctacctgaagagcactattactcagatagagagaaggtttgatatcccttcctctctg
gtgggaataattgatggtagtttcgaaattgggaatctcctggtcataacattcgttagc
tactttggtgccaaacttcacaggccaaaaataattggagcaggatgcctggtcatgggc
tttggaactatgctcatcgcagttccccagttcttcatggagaagtacagctatgagaaa
tatgagaggtattctccctcctccaacctcactcccaacatctctccgtgctacctagag
tccagcagtccatcaccacgctcaatcgtggggaaatcacaaaacaagataaacgatgag
tgtgaagtggataccagttcctccatgtgggtttatgtcttcctgggaaaccttctccga
ggattaggggaaactcctatccaacccctgggcatcgcctacctggatgatttcgccagt
gaagacaatgctgccttctacatcgggtgtgtgcagacagtggcaattatagggcccatt
ttcggcttcctcttgggttcattatgtgccaaactctatgttgatattggctttgtgaat
ctagaccacataactatcaccccaaaggatccccagtgggtcggggcctggtggcttggt
tacctaatagcagggttcctaagtcttcttgcagccgtgcctttctggtgcttacccaag
actctaccaagatcccaaagtagagaggactccggctcctcctctgagaaatccaagttc
attacagatgaccctgttaactaccaaatggcccccagagaagaaagcatgaaaatcatg
gaaatggcgagggattttcttccatcactgaagagtctttttagaaatccagtatacatc
ttatacttgtgtgcaagcactgttcagttcaattctctattcggcatggtcacatataaa
ccaaagtacattgagcagcagtatgggcagtcttcctccaaagccaactttgtcattggt
ctcatcaatattcctgcagtggcccttggaatattctctgggggaatagttatgaaaaaa
ttcaggctgggtatttgtgaagctacaaaactctacttgggatcatctgtctttggctac
ctcctcttcctctctctgtttgcactgggatgtgaaaattccagtgtggccggactaact
gtctcctaccaaggaaccaaacctgtctcttatcatgaacgagctctcttttcagattgc
aactcaagatgcaaatgttcagactcaaaatgggagcccatgtgtggggacaatgggatt
acctatgcgtcggcttgtcttgctggctgtcaatcctccagccggagtggaaagaacatt
atattttctaactgcacttgtgtgggatttgctgcccctaaatcaggaaactggtcaggc
atgatgggcaggtgtcagaaagataatggatgttcccaaatgtttctgtatttccttgtg
atttcagtcatcacatcatatacattatctctaggtggcatacctggatatatattactc
ttgaggtgcattcaaccacaacttaagtcttttgctctgggcatctacaccttagcagta
agagttcttgcaggaatcccagcccccgtgtactttggtgttttaatcgacacttcgtgc
ctcaagtggggatttaagaaatgtggaagcagaggctcctgcagactgtacgactctcat
gctttcagacatatatacctgggactaaccacgctcttgggcacggtgtctgtcttccta
agcacggctgtgcttttggttttaaagaaaaaatacgtctcaaaacgcagcagcttcata
accgcaagagaaaaaatagtgatgtcctcaagcgtcaaaaaggagacgtgtgccgcaagg
gatcatgggttgcagcccaagtactggccaggcaaggagacccgactttaa
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