Rattus norvegicus (rat): 84556
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Entry
84556 CDS
T01003
Symbol
Rims1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04721
Synaptic vesicle cycle
rno04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
84556 (Rims1)
04721 Synaptic vesicle cycle
84556 (Rims1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
84556 (Rims1)
Membrane trafficking [BR:
rno04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
84556 (Rims1)
Small GTPases and associated proteins
Rab associated proteins
84556 (Rims1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PDZ
FYVE_2
PDZ_6
Nudix_N_2
IBR
Motif
Other DBs
NCBI-GeneID:
84556
NCBI-ProteinID:
NP_439894
RGD:
620000
Ensembl:
ENSRNOG00000011000
UniProt:
Q9JIR4
Structure
PDB
LinkDB
All DBs
Position
9:complement(24696959..25196368)
Genome browser
AA seq
1553 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPSSEEGGPERDWRLHQQFESYKEQVRK
IGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKV
VMWVCNLCRKQQEILTKSGAWFFGSGPQQPSQDGTLSDTATGAGSEVPREKKARLQERSR
SQTPLSTAAVSSQDTATPGAPLDRNKGAEPSQQALGPEQKQASRSRSEPPRERKKAPGLS
EQNGKGGQKSERKRVPKSVVQPGEGIADERERKERRETRRLEKGRSQDYSDRPEKRDNGR
VAEDQKQRKEEEYQTRYRSDPNLARYPVKAPPEEQQMRMHARVSRARHERRHSDVALPHT
EAAAAAPAEATAGKRAPATARVSPPESPRARAPAAQPPTEHGPPPPRPAPGPAEPPEPRV
PEPLRKQGRLDPGSAVLLRKAKREKAESMLRNDSLSSDQSESVRPSPPKPHRPKRGGKRR
QMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVT
WQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV
VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP
LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA
TDLPPRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKLLEPKWNQTFVYSHVHRRDFRER
MLEITVWDQPRVQDEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPR
RHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRASARESKATTLTVPEQQRT
THHRSRSVSPHRGDDQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPADHRSR
HVESQYSSEPDSELLMLPRAKRGRSAESLHMTSELQPSLDRARSASTNCLRPDTSLHSPE
RERHSRKSERCSIQKQSRKGTASDADRTHRQGSPTQSPPADTSFGSRRGRQLPQVPVRSG
SIEQASLVVEERTRQMKMKVHRFKQTTGSGSSQELDHEQYSKYNIHKDQYRSCDNASAKS
SDSDVSDVSAISRASSTSRLSSTSFMSEQSERPRGRISSFTPKMQGRRMGTSGRAIIKST
SVSGEIYTLERNDGSQSDTAVGTVGAGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTESGH
KKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRVGPDSQFSDF
LDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKV
YLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVA
QILLEELDLSSMVIGWYKLFPPSSLVDPTLAPLTRRASQSSLESSSGPPCIRS
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccgaggtcctcgcccacccacggtgcctccccctatgcaa
gaactgcccgacctgagccacctgaccgaggaggagaggaacattatcatggcagtgatg
gaccggcagaaggaagaggaggaaaaagaagaggccatgctcaagtgtgttgtcagggac
atggcgaagcctgctgcctgcaaaacaccaagaaatgctgaaagccagccccatcaacca
ccactgaacattttcagatgtgtctgtgttcccagaaagccaagcagcgaagagggaggc
ccagaaagagactggagattgcatcaacagtttgaaagctacaaggagcaagtgagaaaa
atcggagaggaagcgaggcgttaccagggcgagcacaaggatgatgccccgacgtgtgga
atctgtcataagacaaagtttgctgatggatgtggccatctctgctcctattgtcgcacc
aagttctgtgcacgctgcggaggccgtgtgtctctgcgatcgaacaatgaggacaaagtg
gttatgtgggtatgcaatttatgtcgaaagcaacaagaaatcttaacgaaatctggagcg
tggttctttggaagtggccctcagcagcctagtcaagatgggactctgagtgacacggcc
acaggtgctggatctgaggtgccaagagaaaagaaagcaaggctccaagagcgatcaagg
tctcagacgcccttgagtacagcagctgtctcttcccaagacactgctacccccggtgca
ccgttggacaggaacaaaggggctgagccctcacagcaagccttgggtcctgaacagaag
caggcatcaagatcaagaagcgagccaccgagggaaaggaagaaggctccagggctttca
gagcagaatggcaagggaggccagaagagcgagcgcaaacgtgtccccaagtctgtggtg
caacccggggaagggatcgcggatgagagggagaggaaagagaggcgggaaacccgcagg
ttggagaaagggcgctcccaggactactcagaccggcctgagaaacgcgacaatggcagg
gtggcggaagaccagaagcagaggaaggaggaggagtaccagactaggtaccgcagcgac
cctaacctggctcgctacccggtgaaggcgccgccagaggagcagcagatgcgcatgcac
gcccgggtgtcccgagcgaggcacgagcggcgccacagcgacgtggcgctcccgcacacc
gaggcagctgccgccgcgccggctgaggccacggcgggcaagcgcgcgccggccaccgcc
agggtctctcccccggagtccccgcgcgcacgcgcgcccgccgcccagcctcccaccgag
cacgggccaccgccgccgcggccagccccgggtcccgcagagccacccgagccgcgcgtc
cccgagccgctccgtaagcagggccgcctggacccgggctcggccgtgcttctgcgcaag
gccaagcgcgagaaggcggagagcatgctgcggaacgactcgctgagctccgatcagtcc
gagtccgtgcggccatccccgcccaagcctcaccggcccaagcggggaggcaagagacgt
cagatgtcggtgagcagctcggaggaggagggcgtgtccacaccggagtacacgagctgc
gaggacgtggagctggagagcgagagcgtgagcgagaaaggtgacttggattactactgg
ttggatcccgccacgtggcacagcagggaaacgtcgcctatcagttcgcatcctgtaacg
tggcagccgtctaaagagggagatcgactaatcggccgtgttattcttaacaaaagaaca
accatgcccaaagaatcaggtgcattattgggtctgaaggtggttggaggaaaaatgacg
gacttagggcgccttggtgctttcatcaccaaagtaaagaagggcagcctggcagacgtc
gtcggacacctaagagcaggggacgaagtcctagagtggaatggtaaacccctgccggga
gcaacaaacgaagaagtttacaacattatcttagaatcaaaatcagaacctcaagttgag
attattgtttcaaggcctattggtgacatccccaggatccctgagagttcccatcctccc
ctggagtccagttcaagttcctttgaatctcagaaaatggaaaggccttctatttctgtt
atttctccaaccagccctggagctctgaaagatgccccacaagtcttaccagggcaactc
tcagtgaagctatggtatgataaagtggggcaccagctgattgtaaatgttctacaagca
acagatctaccccctagagtagatggccgtcccaggaatccctatgtaaaaatgtatttt
cttccagatagaagcgacaaaagtaaaaggagaaccaaaacagtaaagaaacttctagag
ccaaaatggaaccagacatttgtctactcacacgtacatcgtagagattttcgagagcga
atgttagagattaccgtgtgggaccagccgagagtacaggacgaagagagtgaatttctt
ggagagatcctcatagagttggaaacagcgcttttagatgatgagccccattggtataaa
ctccagacacatgacgaatcttcactacctctgcctcagccatcaccgttcatgcccagg
cggcatattcatggagagagctccagcaaaaagctacaaagatctcagcgaatcagtgat
agtgacatctcagattatgaggttgatgatggtattggagtagtgcctccagtgggttat
agagctagtgctagagagagtaaagcaaccacgttaacagtgccagagcaacaaagaact
acacatcaccgctcacgttccgtgtctcctcatcgcggcgatgatcagggaaggcctcgt
tcacgtttaccaaatgtgccattacagaggagcttagatgaaattcatccaacacgaagg
tcacgttctccaacccgacaccatgatgcctcccgaagcccggccgatcacagatccaga
catgtggaaagtcaatattcgtcagagccagacagtgagcttctcatgctgcccagagca
aaacgaggacgaagtgcagaaagcctacacatgaccagtgaactgcagccctctcttgac
agggctaggagtgctagtaccaactgcttgagaccagatactagtttgcattcaccagaa
cgagaaaggcactccagaaagtctgaaagatgtagcatccaaaaacagtctaggaaaggc
acagcctctgatgcagacagaacgcaccgacaaggaagcccaacccagtctcctccagca
gacacatccttcggcagtcgccgtggaagacagctcccacaggtgccagttcgaagcggc
agtatagaacaagcaagcttagtagtggaggagcgaacgagacagatgaaaatgaaagtt
caccgatttaagcagacaacagggtctgggtctagtcaagaacttgaccacgagcaatac
tccaagtacaacatacataaagatcagtacagaagctgtgataacgcgtctgccaagtct
tcagatagtgatgtcagtgatgtgtccgccatttccagagccagcagtacctcacgcctc
agcagcacaagctttatgtcagagcagtctgagcgccccaggggtaggatcagttcattt
acccccaaaatgcaaggcagacggatggggacttcaggaagagccatcatcaagagcacc
agtgtaagtggagagatatatacactggaacgtaatgacggtagccagtcggacacggcc
gtgggtaccgtcggagccggtggaaagaaacgaagatccagcctgagcgccaaagtggta
gccattgtgtctcgaagaagcaggagcacgtcacagctcagccagacagagtcgggccac
aagaagttgaaaagcaccatccagaggagtacggaaacaggaatggcagctgaaatgcgg
aagatggtgagacagccgagccgggagtccacggatggcagcatcaacagttatagctcg
gaaggaaacttgatatttcctggagttcgagtaggacccgacagtcagttcagtgatttc
cttgatgggttgggaccagcgcagctcgttggccgtcagacgctcgccaccccggccatg
ggcgatatccaaatcgggatggaggataagaagggtcagttggaggttgaggttatcaga
gcccggagccttacacaaaaacctggttccaaatctacacccgctccctatgtgaaagta
tatcttttggaaaatggagcctgtattgccaaaaagaagacaagaattgcacggaaaact
ctcgatcctttgtatcagcagtccctggtttttgatgaaagtccacagggtaaagttctt
caggtgattgtctggggtgactatggaagaatggaccacaaatgctttatgggtgtggct
caaatcttgttggaagaacttgatctatccagcatggtgattggatggtataaattgttc
cctccgtcctcactggtggatcccactctcgctcccctgacccgccgggcttcccaatca
tctctggaaagttcgtccgggcctccctgcatccggtcatag
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integrated database retrieval system
