Rattus norvegicus (rat): 85259
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Entry
85259 CDS
T01003
Symbol
Cnga1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04022
cGMP-PKG signaling pathway
rno04024
cAMP signaling pathway
rno04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
85259 (Cnga1)
04022 cGMP-PKG signaling pathway
85259 (Cnga1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
85259 (Cnga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
85259 (Cnga1)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
85259 (Cnga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
MCU
Tim54
CDC45
Sec62
GrpE
Ndc1_Nup
SLC52_ribofla_tr
NPR3
ADI
DDHD
RNA_pol_Rpc4
DUF4746
Zip
RR_TM4-6
DUF2828
Hid1
Motif
Other DBs
NCBI-GeneID:
85259
NCBI-ProteinID:
NP_445949
RGD:
621815
Ensembl:
ENSRNOG00000004778
UniProt:
Q62927
F1LQN0
LinkDB
All DBs
Position
14:35920948..35959065
Genome browser
AA seq
683 aa
AA seq
DB search
MKTNIINTWHSFVNIPNVVVPAIEKEIRRMENGACSSFSDNDNGSLSEESENEDSLFRSN
SYRRRGPSQREHYLPGTMALFNVNNSSNKDQDPKEKKKKKKEKKSKADDKKESKKDPEKK
KKKEKEKEKKKEEKPKEKKEEEKKEVVVIDPSGNMYYNWLFCITLPVMYNWTMIIARACF
DELQSDYLEYWLIFDYVSDVVYLADMFVRTRTGYLEQGLLVKDKLKLIEKYKANLQFKLD
VLSVIPTDLLYFKFGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIVI
IIHWNACVYYSISKAIGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTIGETPPP
VLDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSKD
MEKRVIKWFDYLWTNKKTVDEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLV
ELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISI
LNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDGLL
DINIANLGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKPL
IETEFSALEEPGGESEPTESLQG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaatattatcaatacgtggcactccttcgtaaatatccccaacgtggttgta
ccagctatcgaaaaggaaattcgacgcatggaaaatggggcgtgcagctcattttctgac
aatgacaatggctctctgtctgaagaatcagagaatgaggactctctctttagaagcaac
tcatacagaaggcgaggaccatcccagagggagcattacttgccaggcaccatggctctt
ttcaatgttaacaacagcagcaacaaagaccaagacccaaaggagaaaaagaaaaagaaa
aaggaaaagaagagcaaggccgatgataaaaaggaaagtaaaaaggacccagagaagaaa
aaaaagaaggaaaaggaaaaagagaagaaaaaggaggagaaacccaaagaaaagaaagaa
gaggagaaaaaagaggtggttgttattgacccttcaggaaacatgtactacaactggctg
ttttgtatcactttacctgtgatgtacaactggacgatgattattgcaagagcatgtttt
gatgaactccagtctgattacctagaatattggctcatttttgattacgtatcagatgta
gtctaccttgctgatatgtttgtacggacaaggacaggttacctggaacaagggttgcta
gtgaaagacaaactgaaactcatagagaagtacaaagcaaacctgcagtttaaacttgac
gttctgtcagtgataccgaccgacctgctgtatttcaagtttgggtggaactatccagaa
atcaggttgaaccggctgttaagaatctctcggatgtttgagttcttccagaggacagag
acaaggaccaactacccgaacatctttaggatctcaaaccttgtgatgtacattgtcatc
atcatccactggaacgcgtgtgtgtactactccatctcaaaagctattggatttgggaat
gacacatgggtctaccctgatgttaatgatcctgaatttggccgtttggctagaaaatac
gtctacagcctttattggtctaccttgactttgacgaccattggagaaaccccacccccc
gtgctggattccgagtatgtctttgtggtggtagacttcttaattggagttttaattttt
gccaccattgtcggtaacataggctccatgatttccaatatgaatgcagcccgggcagaa
tttcaatcaagagttgatgctatcaaacagtacatgaattttcgaaatgtgagcaaagac
atggaaaagagagttattaaatggtttgactacctgtggactaacaaaaagacagtcgat
gagagagaagttctgagatacctccctgacaaactcagggcagagattgccatcaatgtt
cacctagacacgttaaaaaaggttcgtatctttgctgactgtgaggctggtctgttggtg
gagttggtgttgaaattacaaccccaggtgtacagtcctggagattacatatgcaagaaa
ggggacattgggcgggagatgtacatcatcaaggaaggcaaacttgctgtggtggcagac
gacggaatcacacagtttgtggtgttgagtgacggcagctactttggcgagatcagcatt
cttaacatcaaaggcagcaaggctggcaaccgaagaacagccaatattaagagcattggc
tactcggacctgttctgcctctcaaaggatgacctcatggaagctcttacagagtaccca
gatgccaaaactatgttggaggagaaagggaggcagatcttaatgaaagacggtctactg
gatataaacattgcgaatttgggcagtgaccctaaagacctggaagagaaggtcactcga
atggaggggtcagtggacctcctgcaaacacgatttgcccgaatcttggctgagtatgaa
tcgatgcagcagaaactcaagcaaagattaaccaaggttgagaaattcttgaaaccactt
attgaaactgaattttcagcccttgaggaacccggaggagaaagtgaacccacagagtcg
ctacagggctaa
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