Rattus norvegicus (rat): 85432
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Entry
85432 CDS
T01003
Symbol
Ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rno03009
]
85432 (Ddx52)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
85432 (Ddx52)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
90S particles
Helicases
85432 (Ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
HEM4
Motif
Other DBs
NCBI-GeneID:
85432
NCBI-ProteinID:
NP_445977
RGD:
621743
Ensembl:
ENSRNOG00000002612
Vega:
OTTRNOG00000000496
UniProt:
Q99PT0
A6HHJ6
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All DBs
Position
10:69322062..69344856
Genome browser
AA seq
598 aa
AA seq
DB search
MDSYDLFRRLGAGAKFDVKRFSADATRFQVGKRKFGSDSSETVKGLDFFGNKKSVSDECG
GLQTQQELQNEETTEGGLLERSKEPKKKKRKKMTADVPAQEDLDGTIQWTSSVEAKLQDK
KANGEKKLTSEKLEHLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISPRLLQN
ILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALV
ISPTRELASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYL
LKQEPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYD
VEQWCKLNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFV
QSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFK
GVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQAGCPVP
EYIKGFQKLLSKQKKKMIKKPLERESISTTPKYFLEQAKQKKVAGQNSKKKETLKGKS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggattcctacgatctgtttcgccggctcggagccggcgccaagttcgacgtgaagcgg
ttctcagcagacgctactcgattccaggtaggaaaaagaaaattcggttctgattcttca
gagaccgtgaagggactagacttcttcggaaacaagaaatctgtctcagatgagtgtgga
ggattacaaacacagcaggagctccaaaatgaggagacaacagaagggggcctgctggaa
aggagtaaggagccgaagaagaaaaagagaaagaagatgactgcagacgttcctgctcaa
gaagaccttgacgggacgatacagtggacatcctctgtggaagcaaagcttcaagataaa
aaagccaatggagagaagaaattaacttcagaaaagttggagcatctcagaaaggaaaag
atcaacttctttcggaacaaacacaagatacatgtccaaggaactgatcttcctgaccca
attgctacatttcagcaacttgatcaagaatataagatcagtcctcgattgctccagaat
attctagatgcaggcttccaggtgcccacaccaattcagatgcaagccattccagttatg
ctgcatggtcgggaacttctggcttctgctcctactggatccgggaagacgttggcattt
agcatccccattttaatgcagctgaaacaacccacaaataaaggctttagagccctggtt
atatccccaacccgagaacttgccagccagattcacagagaattaattaaaatatctgag
ggtacaggattcaggatacatatgatccacaaagctgcaatagcagctaagaaatttgga
cctaaatcatctaagaagtttgatatccttgtgaccactccaaatcgactgatctacttg
ctgaagcaggagccgccagggatagacctaacaagtgttgagtggctggtagtagatgag
tcggacaaactgttcgaagatggcaaaactgggtttcgagaccagctggcttccattttc
ctggcctgcacatcccccaaggtcagaagagcaatgttcagtgcaactttcgcatatgac
gttgagcagtggtgcaagctcaacctggataacatagtttccgtatccattggagcaagg
aattctgcagttgaaactgttgaacaagagcttctgtttgttggatcggagactggaaaa
cttctggccatgagagaacttgttaaaaaaggcttcaatccacctgtccttgtttttgtt
cagtccattgaaagggctaaagagcttttccatgagctcatatatgaaggtattaatgtg
gacgtcattcatgcagaaagaacacagcagcagagagataacacagtccacagcttcaga
gcaggaaaaatctgggttcttatttgtacagccttgcttgcaagagggattgactttaaa
ggtgtaaacctggtcatcaattatgatttcccaaccagctcagtggaatacatccatagg
ataggtcgaactggaagagcagggaataggggaaaggctgttacatttttcaccgaagat
gataaaccattactaagaagtgttgccaatgttattcagcaggctggttgtcctgtacct
gaatacatcaaaggtttccagaaactactgagcaaacaaaagaaaaaaatgattaagaag
ccattggaaagggagagcattagtacaactccaaaatatttcttagagcaagctaaacag
aaaaaggttgctggccaaaacagcaagaagaaagaaactcttaaaggaaaaagttaa
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