Rattus norvegicus (rat): 89809
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Entry
89809 CDS
T01003
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03030
DNA replication
rno03410
Base excision repair
rno03420
Nucleotide excision repair
rno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
89809 (Rfc1)
03410 Base excision repair
89809 (Rfc1)
03420 Nucleotide excision repair
89809 (Rfc1)
03430 Mismatch repair
89809 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rno03032
]
89809 (Rfc1)
03400 DNA repair and recombination proteins [BR:
rno03400
]
89809 (Rfc1)
DNA replication proteins [BR:
rno03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
89809 (Rfc1)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
89809 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
RuvB_N
BRCT_2
Rad17
AAA_22
AAA_14
AAA_16
AAA_33
AAA_5
AAA_30
AAA_17
AAA_7
Zeta_toxin
AAA_18
nSTAND3
RNA_helicase
NTPase_1
NPHP3_N
TIP49
AAA_28
Motif
Other DBs
NCBI-GeneID:
89809
NCBI-ProteinID:
NP_445999
RGD:
620619
Ensembl:
ENSRNOG00000002855
UniProt:
O88461
Q9Z2R7
LinkDB
All DBs
Position
14:43319768..43395028
Genome browser
AA seq
1131 aa
AA seq
DB search
MDIRKFFGVISSGKKPVNETVKKNEKTKPSEGTVKGKQGVKEAKVNNPCKEDASRPKQHN
KKKRIIYDSDSESEETVQVKNAKKKSEKLPVSCKPGKISRKDPVTYISETDEDDDFLCKK
AASKSKENGVSTNSYLGASNVKKNEENTKTKSKPLSPIKLTPTSVLDYFGTESVQRSGKK
MVASKKKESSQTPDDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLALLDEEPKTKK
ARKDSEEGESFSPAKAELSKAAKQKSPANEHFSIGRKTYSPAKYGKGRGSEGTKQPCRSA
HQKEACSSLKASSKSALMKAQEENSYKETELLAAKRESAIEPKGEKTTPRKTKGSPTKRE
SVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIEREE
AKSLIERYGGKVTGNVSKKTSYLVMGRDSGQSKSDKAAALGTKILDEDGLLDLIRTMPGK
KSKYEIAAEAEMKKEKSKLERTPQKNDQGKRKLSPTKRELEPKKSKLTPLKHSPRKAVKE
EERVCPRGLDAKEPHGSHSASREECLLWVDKYKPTSLKNIIGQQGDQSCANKLLRWLRNW
HKSSPEEKKHAAKFGKVASKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNAS
DTRSKNSLKAIVAESLNNTSIKGFYTSGASPSVSARHALIMDEVDGMAGNEDRGGIQELI
GLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPPP
AMNEIILGANQDVRQVLHNLSMWCAQSKVLTYDQAKADSQRAKKDIRLGPFDVTRKVFAA
GEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMKKHLMLLSRAADSICDG
DLVDNQIRSKQNWSLLPTQAIYASVVPGELMRGYMSQFPSFPSWLGKHSSMGKHDRTVQD
LSLHMSLRTYSSKRTVNMDYLSHIRDALVRPLTSQGVEGVQRVVTLMDTYYLVKEDFDNI
MEVSSWGGKPSTFSKLDPKVKAAFTRAYNKEAHLTPYSLQVVKASRPSIGPALDSEYNEE
SQEDATQSDEKEQDALETDAMIKQKKTRSSKPSKSEKEKESKKGKGKNSKK
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggggttatatcaagtggaaaaaagcctgtaaatgagaca
gtaaagaagaatgagaagacaaaaccttcggagggcactgtcaaaggaaagcaaggagta
aaggaagccaaggttaataatccctgcaaagaggatgcctccagaccaaagcagcacaac
aagaaaaagaggatcatctatgactcagattcagaatcagaggagacagtgcaagtaaaa
aatgctaaaaagaaatcagaaaaattgccagtgtcttgtaaacctggtaaaatctctcgg
aaggatcctgttacctatatttctgagacagatgaagacgatgactttttatgtaaaaag
gcagcctccaaatcaaaagagaatggagtatctacaaacagttaccttggagcatcaaac
gtgaaaaagaatgaagaaaacactaagactaagagtaaaccgttatcaccaataaaacta
acaccgacatcagtgcttgattattttggaactgaaagtgtccagagatctgggaagaag
atggtggcgagcaaaaagaaagagtcttctcaaaccccagatgattccagattaaatgat
gaggccatcgccaagcagcttcagcttgatgaagatgcagagctggagaggcagttgcat
gaagatgaagaatttgcaagaacactggccttgttggatgaagaacctaagaccaaaaag
gctcgaaaggactctgaagagggagaatcattttcacctgccaaagctgagttaagcaaa
gcagcaaagcagaagagccctgctaacgagcatttctcaattggaagaaagacctacagt
cctgctaagtacggcaagggtagaggctcagaaggcaccaagcagccctgcagatcagct
caccagaaggaagcctgctcctctctcaaggccagctccaagtcggctcttatgaaagca
caagaagaaaattcttacaaagaaacagaactgctggctgcaaaaagagaaagtgccatt
gagcccaaaggagagaaaacaactcctaggaaaacgaaaggctctccaactaaaagagag
tctgtaagcccagaagattctgaaaagaagcgcaccaattatcaagcttatcgaagctac
ttaaatcgagaaggtcccaaagccctgggctccaaagaaatacccaagggagctgaaaac
tgcttggagggcctgacgttcgtgatcaccggagtgctggagtccatcgaacgagaagaa
gccaagtctctaattgaacgttatggggggaaagtaacaggaaacgtgagcaagaaaacc
agctacctcgtcatgggccgggacagcgggcagtccaagagtgacaaggcagcagctctg
ggaacaaaaatccttgatgaagacggcctgttggatctgattcgaactatgccgggcaaa
aaatccaagtacgaaatcgctgctgaggctgagatgaagaaagaaaagtccaaattggag
agaacaccccaaaaaaatgatcagggaaaaagaaaacttagtccaaccaagagggagttg
gagcctaaaaagagcaagctgactccccttaagcacagccctcggaaggcagtgaaggag
gaggaacgtgtgtgtccgaggggcttggacgccaaggagcctcatggcagccacagtgcc
agcagagaggagtgcctgctctgggtggataagtacaagcccacctcactcaagaacata
atcggacagcagggtgaccagagctgtgccaacaaactgctacgctggctcagaaactgg
cacaagagttctccagaagagaaaaagcatgcagcaaaatttggcaaagttgccagcaaa
gatgatggctccagtttcaaggcagcactgctgtctggccctccaggtgttggcaaaacc
actacagcttctcttgtgtgtcaggaattgggctacagttatgtggaactaaatgcgagt
gatactcggagtaagaacagtctgaaagcaattgttgctgagtcattgaacaacaccagc
atcaaaggcttttatacaagtggagcatctccttctgtaagtgcgaggcatgctctcatc
atggatgaagttgatggcatggcgggcaatgaggacaggggtggaattcaggagctaata
ggcctgataaagcatacgaaaattcccatcatttgtatgtgcaatgatagaaatcacccc
aaaatccgctcattggttcattattgttttgatcttcgtttccaaagacctcgagttgaa
cagattaagagtgcaatgctgtctattgcatttaaagagggattaaagatcccacctcca
gctatgaatgaaataattttgggagctaatcaagatgtcagacaggttttacacaatctc
agtatgtggtgtgcacagagtaaggtcctaacctatgaccaagccaaggctgattctcag
agggccaagaaggacatcagattgggcccatttgatgtcacccggaaagtgtttgcagct
ggagaggagactgcacacatgtcactgatggacaaatcggatctctttttccatgactat
tccattgcacccctctttgtccaggagaactacctccatgtaaagcctgtggctgcaggg
ggtgacatgaaaaagcacttgatgcttttaagccgggcagcagatagcatatgtgacggt
gacttagtggacaatcagatccggagtaagcaaaactggagtcttctgcccacacaggcc
atttacgccagcgttgttcctggagagttgatgaggggctacatgtctcagtttcccagc
ttcccaagctggctgggaaagcactcgtctatgggcaagcatgatcggactgttcaggac
ctgtccttgcacatgagtcttagaacttactccagcaaaaggacagtgaacatggattac
ctgtcacacatcagagacgcacttgtacgacccttgacctcacaaggagtagaaggggtt
cagcgtgttgtcacacttatggatacatactatttggtgaaagaagattttgacaacatc
atggaagttagcagctgggggggcaagcccagtaccttttccaagctggaccccaaggtg
aaagcagccttcacaagagcctataataaggaggcccacctgaccccatactcacttcag
gtggtaaaggcatcgaggcccagcataggtccagcactggattctgagtacaatgaagag
tcacaggaagatgccactcagtctgatgagaaagagcaggatgccctagagactgatgcc
atgatcaagcagaaaaagacgagatcttcaaagccttcaaaatcagaaaaagagaaggag
tccaaaaaaggaaaaggaaaaaattcgaagaaatga
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integrated database retrieval system
