Rattus norvegicus (rat): 89828
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Entry
89828 CDS
T01003
Symbol
Chl1
Name
(RefSeq) cell adhesion molecule L1-like precursor
KO
K06758
L1 cell adhesion molecule like protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
89828 (Chl1)
Cell adhesion molecules [BR:
rno04515
]
Immunoglobulin superfamily
L1 family
89828 (Chl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_PDGFR_d4
Fn3_VIN3
Ig_Rha78A_N
ICAM_N
Glyco_transf_10
Motif
Other DBs
NCBI-GeneID:
89828
NCBI-ProteinID:
NP_001414037
RGD:
620122
Ensembl:
ENSRNOG00000045771
LinkDB
All DBs
Position
4:137847648..138062077
Genome browser
AA seq
1208 aa
AA seq
DB search
MELPLGGRGLILSLIFLLLKLSTAEIPLSVHQVPTIVKQSYVQVAFPFDEYFQIECEAKG
NPEPKFSWTKDDKPFDLSDPRIIAFNNSGTFRIPNEGHISHFQGKYRCFASNRLGTAISE
EIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCNPPKGHPPLHIYWMNIELEHIEQDERVY
MSQKGDLYFANVEEKDSRNDYCCFAAFPKLRTIVQKMPMKLTVNSSNSIKQRKPKLLLPP
AQIGSASSKTVLKGDTLLLECFAEGLPTPQIEWSKLGSELPKGRATIEIHEKTLKIENVS
YQDRGNYRCTANNLLGKASHDFHVIVEEPPRWKKKPQSAVYSTGSNGILLCEAEGEPQPT
IKWRVNGLPIENHPFPGDVMFPREISFTNLQPNHTAVYQCEASNIHGTILANANIDVVDV
VPLIQTKNEENYETVVGYSAFLHCEYFASPKATVVWEVADETHPLEGGRYHTHENGTLEI
ERTTEEDAGSYSCWVDNTMGKAVITANLDIRNATKLRVFPKNPRIPKSHVLELYCESQCD
SHLKHSLKLSWSKDGEAFEMNGTEDGRIVIDGANLTISNISGEDQGIYSCSAQTALDSTS
GKTQVTVLGVPDPPRNLLLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKWEE
LTRVRGEETDVVLPLAPYVRYQFRVTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQ
ASQPKEMIIKWEPLKSMEQNGPGLEYRVSWKPQGAPEEWEEETVTNHTLRVMTPTVYAPY
DVQVQAINQLGSGPEPQPVTLYSGEDYPSTAPVIHRVDVMNSTLVKVTWSSIPKETVHGL
LRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLEPFSEFHLTVLAYNSKGAG
PESEPYIFQTPEGVPEQPSFLKVIKVDKDTATLSWGLPKKLNGNLTGYLLQYQIINDTYE
LGELNEINVTTPSKSSWHLSNLNATTKYKFYLKACTSRGCGKPISEEGATLGEGSKGIRK
ITEGVNVTQKSHPVEVLVPGAEHIVHLMTKNWGDNDSIFQDVIETRGREYAGLYDDISTQ
GWFIGLMCAIALLTLILLTVCFVKRNRGGKYSVKEKEDLHPDPEVQSAKDETFGEYSDSD
EKPLKGSLRSLNRNMQPTESADSLVEYGEGDQSIFNEDGSFIGAYTGAKEKGSVESNGSS
TATFPLRA
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggaattgccattaggtggaagaggattgatcctgagtctaattttcctcctgttaaaa
ttgtcaacagctgaaataccactctcagttcaccaggttccaacaatcgtaaagcagtca
tatgtgcaagtggcctttcccttcgatgagtattttcaaattgaatgtgaagcaaaagga
aaccctgaaccaaaattttcatggaccaaggatgataagccttttgatctctctgaccct
cggataattgcatttaacaactcaggcacattcaggatcccaaatgagggccacatctct
cattttcaaggaaaataccgctgttttgcatctaacagactaggaactgcaatatcagaa
gaaatagagttcatagttccaggtgttccaaaattcccaaaagaaaaaattgaacccatt
gatgtagaagaaggggattccattgtcctaccctgcaaccctcccaaaggccacccacct
ttacacatctattggatgaatattgaattagaacacattgaacaagatgaacgagtgtac
atgagccagaaaggagatctttactttgcaaatgtggaagaaaaagacagtcggaatgat
tactgctgcttcgctgcatttccaaaattaagaacgattgtacaaaaaatgccaatgaaa
ctaactgtgaacagttcaaattccatcaagcaaaggaaacccaagctactgttgcctcct
gctcaaattggcagtgcatcctcaaagactgtactcaaaggggataccttgttgctcgag
tgttttgcagagggcctaccaactccacagatcgagtggagcaaactgggtagtgaatta
ccaaagggaagagcaacaattgaaattcatgaaaagacattgaagatagaaaatgtctcc
taccaggacagaggaaattatcgctgtacagccaacaatttgttggggaaagccagtcac
gattttcacgtcatagtagaagagcctccccgctggaaaaagaagcctcagagtgccgtg
tacagcacagggagcaacggtatcttgttgtgtgaagcagaaggagaaccccagcccaca
atcaaatggagagtcaatggcttgccgattgaaaatcatccatttcctggtgacgttatg
ttccccagggaaatcagttttacaaacttacagccaaatcatactgctgtatatcagtgc
gaagcctcaaatattcatggaaccattttggccaacgccaatattgatgttgtagatgtt
gttccactgatacaaactaagaatgaagaaaactatgaaactgtggttgggtacagcgct
ttcttacactgcgagtactttgcttcacccaaggccacagtggtctgggaagtggctgat
gaaacacatccccttgaaggtggtcggtatcatactcatgaaaacggcacactggagatc
gaaagaactactgaggaagatgcaggctcatactcttgttgggtagacaacacaatggga
aaggccgtcatcacggcgaacttggatattcgaaatgctacgaagctcagagtttttcct
aagaatcctcgaatccctaaatcacatgtgcttgaactatactgtgaaagccagtgtgac
tcacatttgaaacacagtttgaagttgtcctggagtaaagatggagaagcttttgagatg
aatggcacagaagatggcaggatcgtgattgacggggctaatctgaccatatctaacatc
tcaggagaagatcagggtatttactcctgttctgctcaaactgctcttgatagtacttcg
ggaaaaactcaagtaaccgtccttggtgttccagatcctcccagaaaccttctcctgtca
gaaagacaaaacaggagtgtccggctgtcctgggaagcaggagatgaccacaacagcaaa
atcagcgagtacattgtagaatttgaagggaacagagaggaacctggaaagtgggaggaa
ctaactagagtccgaggagaagaaacagatgttgtgctacctttggctccgtatgtgaga
tatcagtttagggtcacagctgtaaacgaagtcggaaaaagtcactccagccaaccatca
gaccatcatgaaactccaccagcagctccagacaagaatccacataacatcagagttcaa
gcatctcaacccaaggaaatgattataaaatgggagcctttgaaatctatggagcagaac
ggaccaggactggagtacagagtgagctggaagccccagggagcccctgaagagtgggaa
gaagaaacagttacaaaccacacattacgtgtgatgacacctactgtctatgctccttac
gatgtccaagttcaagccattaatcaactaggctctgggcctgagccccagccagtgaca
ctctattcaggggaagactatcctagtacggctcctgtgatccatcgtgtggatgttatg
aacagtacattagttaaagttacctggtcatcaattcctaaggaaacagtacacggacta
ctaagaggataccagataaattggtggaaaacaaaaagcctgttggatggaaggacacat
cccaaagaagtgaacattctaaggttttcaggacagcgaaattctggaatggttccttcc
ctagagccctttagtgaatttcacttaacagtcttagcctataattccaaaggagctggt
ccagagagtgagccgtatatatttcagacaccagaaggagtacctgaacaaccaagtttt
ctcaaggtcatcaaagttgataaagacacagccaccttatcctggggccttcctaagaaa
ctaaatggaaatttaactggttatctcttacaataccagataataaatgacacttacgag
cttggagagttaaatgaaatcaacgttacgactccatctaaatccagttggcatctctcc
aacctcaacgcaacaacaaaatacaaattctacttgaaggcatgcacctcgagaggctgt
gggaagccgatcagtgaggaaggtgccacactaggagaggggagtaaaggtatcaggaag
ataacagaaggagtaaatgttacccaaaagagtcaccctgtagaggtacttgtgccggga
gcggaacatattgttcacctaatgactaagaattggggtgataacgatagcatttttcaa
gatgttattgagacaagagggcgagagtatgctggcttatatgatgatatctccactcaa
ggctggtttattggactgatgtgtgcaattgctcttctcacactgatattgttaactgtt
tgctttgtgaagaggaacagaggtggaaagtattcagtaaaagaaaaggaagatttacac
ccagatccagaagttcagtcagcaaaagatgaaacttttggtgaatacagtgacagtgat
gaaaagcctctcaagggaagccttcggtccctgaatagaaacatgcagcccacagagagt
gctgacagtttagtggaatatggagaaggagatcagtccatattcaacgaagatggatca
tttattggcgcctacacaggagctaaggagaaaggatctgttgaaagcaatggaagttca
actgccaccttcccactccgagcataa
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integrated database retrieval system
