Rattus norvegicus (rat): 89868
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Entry
89868 CDS
T01003
Symbol
Sec16b
Name
(RefSeq) protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
89868 (Sec16b)
Membrane trafficking [BR:
rno04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
89868 (Sec16b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
89868
NCBI-ProteinID:
NP_446023
RGD:
621658
Ensembl:
ENSRNOG00000005229
Vega:
OTTRNOG00000000156
UniProt:
Q75N33
LinkDB
All DBs
Position
13:72206778..72260733
Genome browser
AA seq
1057 aa
AA seq
DB search
MELWVPQTQGRTTGPSRDANRRLQSGHYRPRPHPQYSGDNYHQWQDTHKNSKPQQDPRDD
HQQPHYVPRSGEWSQPVSGADYLKGSYPSHPYSRSGYEDPYQSYHTPTPRDEYAYGNYYY
HGHPQLPQGERVARQGSPYIWHEDHRDQRHFSEHHWEKHNSTFEANSDTQFQFTSKNPYN
DNPASAFGLEQPGEFFPESGAQKQKPSLTSKSNLLQQHESGLSSSSYELSQYMTEAPEQY
EPMVSATWRPIQADDTSATVPKAPMRFYVPHVSVSFGPGGQLICVSPNSPADGQTALVEV
HSMEVILNDFEDQEEMRAFPGPLIREDIHKVDIMTFCQKKAAQCLKSETPGSRDSALLWQ
LLVLLCRQNGSMVGSDIAELLMQDCKKLEKYKRQPPVANLINLTDEDWPVLSSGTRNLLT
GEIPLNVDTPAQIVEKFTNLLYYGRKKEALEWAMKNHLWGHALFLASKMDPRTYNWVMSG
FTTTLALNDPLQTLFQLMSGRIPQAATCCGDKQWGDWRPHLAVILSNQAGDAELYQRAIV
SMGDTLAGKGLVEASHFCYLMAHVPFGHYTVKTDHLALVGSNHSQEFLKFATIEAIQRTE
IFEYCQMLGRPKSFIPSFQVYKLLYASRLADYGLASQALHYCEAIGAAVLSEGGSSHPVL
LAELIKLAEKLKLSDPLVLESRRGDRVLEPDWLVQLRRKHKELEQTRTGDLRDPDLTPSD
IYGARGTTDTPYRDLYGQQNYSEDSEYSSALWPTSEQTSLTNPTPQQPFPLQRDTYSERD
GPVHMGTPVPLYSVPATHLTVISGSSSGSGVAVTGAPGGRVGEEMLQKHPALGENTVPQE
AVQDPDGLAVISSPQTPLAPRDRSFSEDSAISAKEDEEGTSDGADKPPHPDASQKEKLRD
GKNTKSSGFGWFSWFRSKPASSVSTSGDEDSVDSSDSEESPRASPPHHASLGLSPTPPLS
SPSLPGASTFPRGTGGNSLQGSSNSSGMAEGVGIGGFSGPQGVSSEFYSQPGALPPPPTL
QGAVPLYNPSQVPQLPTASSLNRPNRLAQRRYPSQPC
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggaactttgggttcctcagacacaaggaaggaccacgggaccatcaagggatgcaaat
agaagacttcagagtggacattatagaccccgtcctcaccctcagtacagcggagataac
taccaccaatggcaggatacccacaagaactcaaagccacagcaggaccccagggatgac
caccaacagccacactatgtacccaggagtggggagtggtcccagcctgtgtctggagct
gactacttgaaaggatcttatcccagtcacccatactcaaggtcaggctacgaggacccc
tatcagagctaccacactccgacaccgagggatgagtacgcttatggaaattactactac
cacgggcatccacagctgccgcaaggagaaagagtggcaaggcaagggagtccttatatc
tggcatgaagatcacagagaccaaaggcacttcagtgagcatcattgggaaaagcacaac
agtacatttgaagcaaacagtgacacccaattccaatttaccagtaagaatccatacaat
gacaaccctgcttccgcgtttggactggagcagcctggggagttctttccagagagtgga
gcccagaaacaaaagccatcgttgaccagcaaatccaaccttctccaacagcacgagtct
gggctcagctctagtagctatgagctcagtcagtacatgaccgaggcccctgagcagtat
gaacctatggtgtcagcaacttggaggcctattcaagctgatgacacctcagcgaccgtt
cccaaggcacccatgaggttctacgttccccacgtgtctgtgagctttgggccaggaggc
cagctgatatgtgtgtcccccaactctcctgctgatggacaaacggcccttgttgaagtg
cacagcatggaggttatacttaatgattttgaggatcaagaggagatgagagctttccca
gggcccctcatcagggaggacatacacaaggtggatatcatgacattttgtcagaagaaa
gcagctcagtgtctcaaatctgagacgccagggagcagggactcagctctgctttggcaa
ctgctggttctcctttgtcgacagaatgggtccatggtggggtctgacattgccgagctg
ctgatgcaagactgcaagaagctggagaagtacaagaggcagccccctgtagccaacctc
atcaacctgactgacgaggactggccggtgctgagttctgggactcgcaacctgctcact
ggggagattcccctcaacgtggatacgcctgcgcagatcgtggagaaattcaccaatctg
ctctactatggaaggaagaaggaggccttggaatgggctatgaagaaccacttgtggggc
catgccttgttcctagccagtaagatggatccaaggacctacaactgggtcatgagtggc
ttcaccactacgctggcgctcaatgaccctctgcagaccctcttccagctcatgtcagga
aggattccacaagcagccacgtgttgtggagacaaacagtggggagactggcggccccat
ttggctgtgatcctgtcaaatcaggccggagacgcagagttgtaccagcgagcgattgtc
agcatgggggacaccctggctggaaaagggcttgtggaggcatctcacttctgctacctc
atggctcacgtgcccttcggccactatacggtgaagacagaccatctggccttggtgggc
agtaaccacagtcaagagtttttgaaatttgcaacaattgaggctatccagcggacggaa
atcttcgagtactgccagatgctgggccgccccaaatccttcatcccgtccttccaggtg
tataagctcctttatgcttcccgtctggcagattacggcctggcatcccaagccttgcat
tactgtgaagccattggtgcagctgtcctgagcgagggagggagcagtcaccccgtgcta
ttagcggagctcatcaagcttgcagagaaactgaagctgtcggatcctctggttttagaa
agccgccgtggggacagggtcctggaaccggattggcttgtgcaactgcggaggaagcac
aaggaactggagcaaactagaactggagacctcagagatcctgatctgactccttcagat
atttatggagccagaggaacaacagacactccctaccgcgatctttatggccagcaaaac
tactcagaagactctgagtacagctcagccttgtggccaacatctgagcagacaagcctg
accaatcccaccccacagcagcctttccccctgcagcgagatacctactcagagagagat
ggcccagtacacatggggaccccagtgcctctttactcagttcctgcaacccacctgaca
gtgattagtggctccagtagtggcagcggtgtggcagtgacaggggctcctggaggaagg
gttggagaggagatgctgcagaaacatcctgcccttggagagaacacagtgcctcaagaa
gccgtgcaggatcctgatggtctagcagtcatttccagtcctcagacaccactggctccc
agggatcgaagtttttctgaggattctgccatttcagccaaggaggatgaggagggcact
tctgatggagcagacaaaccacctcaccctgacgcttcacagaaagaaaagctgagagat
gggaagaatacaaagagctctggattcggctggttcagctggtttcgatcaaagcctgcc
agcagtgtgtccacctctggagatgaagactctgtggacagttctgactcagaggagtct
cccagagcatcacctcctcaccatgccagcctgggcctctcaccaacacctcctctctca
tccccatctctgccaggtgccagcaccttcccgagaggcacaggtgggaatagtctccag
ggatcctcaaacagcagtggaatggctgaaggcgtggggattggagggttctcggggcca
cagggcgtttcttctgagttctactcccagcctggtgccctgcctcctccacctaccttg
caaggtgctgttcctctctacaatccatctcaggtccctcagcttcccactgctagtagc
ctgaaccggccaaaccgcctagcccagcgccgctacccaagccaaccatgctga
DBGET
integrated database retrieval system