Rattus norvegicus (rat): 93646
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Entry
93646 CDS
T01003
Symbol
Sec31a
Name
(RefSeq) protein transport protein Sec31A
KO
K14005
protein transport protein SEC31
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
93646 (Sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
93646 (Sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rno02044
]
93646 (Sec31a)
Membrane trafficking [BR:
rno04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
93646 (Sec31a)
Secretion system [BR:
rno02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
93646 (Sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
WDR55
WD40_MABP1-WDR62_2nd
TPR_Sec16
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Prp18
SRA1
Motif
Other DBs
NCBI-GeneID:
93646
NCBI-ProteinID:
NP_148981
RGD:
620233
Ensembl:
ENSRNOG00000002251
UniProt:
Q9Z2Q1
A6K602
G3V699
LinkDB
All DBs
Position
14:9518655..9573579
Genome browser
AA seq
1249 aa
AA seq
DB search
MKLKEIDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSC
ATFSSSHRYHKLIWGPHKMDSKGDVSGVLIAGGENGNIILYDPSKIIAGDKEVVIAQKDK
HTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATPMTPGAKTQPPEDISCIAWNRQV
QHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASEDDRLPV
VQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLSCGKDAKILCSNPNTGEVLYELP
TNTQWCFDIQWCPRNPAVLSAASFDGRIRVYSIMGGSIDGLRQKQVDKLSSSFGNLDPFG
TGQPLPPLQIPQQTSQHSIVLPLKKPPKWIRRPVGASFSFGGKLVTFENVTGQPQQGAEQ
PRRQPVFISQVVTEKDFLSRSEQLQHVVQSQGFISYCQKKIDASQTDFEKNVWSFLKVNF
EEDSRGKYLELLGYRREDLGEKIALALNRVDGSDVALKDSDRVAQSDGEESPAEEGQLLG
ERIKEEKQECDFLPSAGGGTFNISVSGDIDGLITRALLTGNFESAVDLCLHDNRMADAII
LAIAGGQELLAQTQKKYFAKSQSKITRLITAVVMKNWKEIVESCDLKNWREALAAVLTYA
KPDEFSALCDLLGARLESEGDSLLRTQACLCYICAGNVERLVACWTKAQDGSNPLSLQDL
IEKVVILRKAVQLTQALDTNTVGALLAEKMSQYANLLAAQGSIAAALAFLPDNTNQPDIV
QLRDRLCRAQGRSVPGQESSRSSYEGQPLPKGGPGPLAGHPQVSRVQSQQYYPQVRIAPT
VTTWSDRTPTALPSHPPAACPSDTQGGNPPPPGFIMHGNVVPNSPAPLPTSPGHMHSQPP
PYPQPQPYQPAQQYSFGTGGSAVYRPQQPVAPPASNAYPNAPYVSPVASYSGQPQMYTAQ
PASSPTSSSAPLPPPPSSGASFQHGGPGAPPSSSAYALPPGTTGTPPAASELPASQRTGP
QNGWNDPPALNRVPKKKKLPENFMPPVPITSPIMNPGGDPQPQGLQQQPSASGPRSSHAS
FPQPHLAGGQPFHGIQQPLAQTGMPPSFSKPNTEGAPGAPIGNTIQHVQALPTEKITKKP
IPDEHLILKTTFEDLIQRCLSSATDPQTKRKLDDASKRLECLYDKLRDQTLSPTIISGLH
SIARSIETRNYSEGLTVHTHIVSTSNFSETSAFMPVLKVVLSQASKLGV
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaggagatagaccgcacggcgatgcaggcgtggagccctgcccagaaccac
cccatttacctggccacagggacatctgctcagcagttggacgcgacattcagtaccaac
gcttcccttgagatattcgagctcgacctttccgacccgtccttggatatgaagtcctgt
gctactttctcctcgtctcacaggtaccacaagctgatctggggacctcataaaatggat
tccaaaggagatgtttctggagttttgattgcaggtggagaaaatggaaacattattctc
tacgatccttctaaaattatagctggagacaaggaagttgtgattgcccaaaaggacaag
catactgggccagtgagagccttggatgtaaacatcttccagaccaatttggtggcctct
ggtgctaatgaatctgaaatctacatttgggatctaaacaattttgcaactccaatgacg
ccaggagctaaaacacagccaccagaagatatcagctgcatagcctggaacagacaggtc
cagcatatcttagcatcagccagtcccagtggccgggcaacggtctgggatctcaggaaa
aacgagcctattatcaaagtcagcgaccacagtaacaggatgcactgctctgggctggca
tggcaccctgatgtcgctactcagatggtccttgcttctgaggatgatcgattaccagtg
gtccagatgtgggatcttcgatttgcttcctctcccctccgggttctggaaaatcatgcc
agggggattttggcaattgcttggagcatggcagatcctgaattgttgttaagctgtgga
aaagatgctaagattctctgctctaaccctaacacgggagaggtattatatgaacttccc
accaacacacagtggtgctttgatatccagtggtgtcctcggaatcctgccgtcctgtct
gccgcttccttcgatggtcgcatccgtgtctactccatcatgggagggagcatagacggc
ttaaggcagaaacaagttgacaagctttcgtcgtcttttgggaatcttgatccgtttggc
acaggacagccgctccctccattacaaatcccacagcagacttcacagcacagcatcgtg
ctgcccctgaagaagccacccaagtggatccggagacctgtgggcgcctccttctcattc
ggagggaagttggtgactttcgagaacgttacagggcagcctcagcagggagctgagcag
ccacggcggcagcccgtgttcatcagtcaggtggtgacagaaaaggacttcctcagccgc
tcagagcagctacagcacgtcgtgcagtctcagggctttatcagttactgccagaaaaag
atcgatgcgtcccagactgacttcgagaagaatgtgtggtccttcttgaaggtaaacttt
gaggaggattctcgtgggaaataccttgagcttcttggatatagaagagaagatctggga
gagaagattgctttggccttgaacagagtggacggatccgatgtggctcttaaggactct
gaccgagtagcgcagagtgatggggaggagagccctgccgaggaagggcagctcctggga
gagcgcattaaagaggaaaaacaggagtgtgactttctgccctcggctggcggtgggacc
tttaacatctccgtcagtggggatattgatggtttaattacccgggctttgctgaccggc
aattttgagagcgcagttgacctttgtttacacgataaccgaatggctgatgccatcata
ttagccatcgcaggtgggcaggagctcttggctcaaacgcagaagaaatactttgcaaaa
tcccaaagcaagattaccaggcttatcactgcggtggtgatgaagaactggaaggagatt
gttgaatcctgtgatcttaaaaattggagagaggctttagctgcggtcctcacttatgct
aagccagatgagttctccgccctgtgtgatctcttgggagccaggcttgaaagtgaagga
gacagcctcctgcggactcaggcctgcctctgctatatctgtgccgggaatgtagagaga
ttagttgcttgttggaccaaagctcaagatggtagcaaccccttgtctctccaggatctg
attgagaaagttgtcatcctccgaaaagctgtacagctcacgcaagccctggacacgaac
actgtcggggctcttctggccgagaagatgagtcagtatgccaacttgttggcagcccag
ggcagtattgccgcggccttggcgtttctgcctgacaacaccaaccagccagatatcgtg
cagctgcgtgacagactctgcagagctcaaggcaggtctgtgccggggcaggagtcctct
aggagctcctacgaggggcagccgctgcccaagggcgggcccgggccgcttgctggccac
ccgcaggtgtccagagttcaaagtcagcaatattatccccaggttagaattgcccctact
gtcactacctggagtgacagaactcccactgccctccccagccatccacctgcagcctgt
ccctctgacacacagggagggaatcctccacctccaggtttcataatgcatggcaacgtt
gttccaaatagccctgccccactgccgacgtctccaggccacatgcacagccagccacca
ccttatccgcagccgcagccttaccagccagcccagcagtattccttcggaacagggggg
tcagcagtttatcgacctcaacagcctgttgctcctcctgcttctaacgcttaccctaac
gccccatacgtatctcctgtcgcttcctactccgggcagcctcagatgtacacagcacag
ccagcctcctcccctacctccagctctgctcctcttccccctcccccttcctctggagcg
tccttccagcatggcggaccaggagctccaccgtcatcttcagcttatgcactgcctcct
ggaacaacaggtacaccgcctgctgccagtgagctgcctgcgtcccagagaacaggtcct
cagaatggttggaatgatcctcccgctttgaacagagtaccgaagaagaagaagctgcct
gagaacttcatgcctcctgtccccattacgtcaccaatcatgaaccccgggggagatccc
cagccacaggggctgcagcaacagccttcagcttcagggccacggtcaagccacgcctcc
ttcccgcagccgcacctagccggcggccagcccttccacgggatccagcagcctcttgct
caaacaggcatgccaccgtctttctcgaagcccaacactgaaggggcccccggcgctccc
attgggaacaccatccagcatgtgcaggctctgccaacagaaaaaattaccaagaagcct
attccagacgagcacctcattctaaagactacgtttgaggaccttatccagcgctgcctc
tcctcagctacagacccccaaaccaagaggaagctggacgacgccagcaaacgcctggag
tgtctgtacgacaaacttagggaccagacactttctccaacaatcatcagcggtctccac
agcattgcgaggagcattgagacgaggaactactctgaagggttgaccgtccacactcac
atcgtcagcaccagcaacttcagtgagacctcagccttcatgccagtcctcaaggttgtg
ctcagccaggccagtaagctgggcgtctga
DBGET
integrated database retrieval system
