Rhodococcus opacus PD630: Pd630_LPD00004
Help
Entry
Pd630_LPD00004 CDS
T03071
Name
(GenBank) DNA replication and repair protein recF
KO
K03629
DNA replication and repair protein RecF
Organism
roa
Rhodococcus opacus PD630
Pathway
roa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pd630_LPD00004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD00004
DNA repair and recombination proteins [BR:
roa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pd630_LPD00004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
ABC_ATPase
ABC_tran
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AHK27255
LinkDB
All DBs
Position
4851..6083
Genome browser
AA seq
410 aa
AA seq
DB search
MFVRALSLRDFRSWDALGLTLRPGCTVFVGPNGHGKTNVLEALGYLSTLSSHRVSSDAPL
IRTGTGQAFAGATVVNAGRELTVDLELNEGKSNRARINQSPTRRPREILGILQTVLFAPE
DLSLVRGDPGDRRRYLDELLTSRLPRMAAVRADYDRVLRQRSALLKTAGGALRRVSRGGG
QPSEDGASALATLEVWDGHLAAHGAQLLAGRLHLVHDLAPHLAESYQSLAPESRPASIRY
RSSLGSSLPPEFTEPARVPDAGDIAFLEERFLQELSVMRSKEIERGVCLVGPHRDDLELQ
LGDTPAKGFASHGESWSFALSLRLAGFALLRSEGSDPVLMLDDVFAELDRRRRRALAKVA
LDAEQVLITAAVPEDVPEELDAVRFGVEARDTDRGRISHIVEETEDRRDG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgttcgcgcactctcgctcagagacttccgctcctgggacgccctcggtctcacc
ctgcgtccgggctgcaccgtcttcgtcggacccaacggtcacggcaagacgaacgtgctc
gaggcgctcggctacctgtcgaccctctcgtctcatcgggtcagctcggacgccccgctg
atcaggacggggaccggtcaggcattcgccggggccacggtcgtcaacgccggccgggaa
ctgaccgtcgatctcgagttgaacgagggcaagtccaaccgggcacggatcaaccagtcg
cccacccggcggccgcgggagattctcgggattctgcagacggtgctgttcgcgccggaa
gatctgtcgctggtccgcggcgatccgggtgatcggcggcgctacctcgacgagctcctc
acgtcccgactcccgcggatggcggcggtgcgcgccgattacgaccgggtgctgcggcag
cggtcggcgctgctcaagaccgcaggcggcgcgttgcgacgggtgtcgcgcggcggcggc
cagccgagcgaggacggcgcgagtgcccttgccacgctggaggtctgggacggacatctc
gccgcacacggcgcgcagctgctcgccggacggcttcacctcgtccacgatctcgctccg
catctggccgagtcgtaccaatcgctggcgccggagtcgaggcccgcgagcatccgctac
cgctcgagtctgggctcgtcgctgccgccggagttcaccgaaccggctcgagtgcccgat
gcgggcgatatcgcgtttctcgaggagcggttccttcaggagctgtccgtgatgcgctcc
aaggagatcgagcggggtgtgtgtctcgtcggcccgcatcgtgacgatctcgaactgcaa
ctcggcgacaccccggcgaagggattcgcgagtcacggtgagtcgtggtcgttcgcgctg
tcgttgcggctggcgggattcgccctgctgcgttcggagggcagcgatcccgtcctcatg
ctcgacgacgtgttcgcggagctcgatcgacgtcgacggcgcgcactcgccaaggtcgcg
ttggatgcggaacaggtgctcatcacggcggccgtgccggaagatgttccggaggagctc
gacgccgtccgattcggcgtggaggcccgcgacaccgatcgaggacgaatatcgcacatt
gtggaagagacggaggaccgccgtgacggatga
DBGET
integrated database retrieval system
