Rhodococcus opacus PD630: Pd630_LPD00016
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Entry
Pd630_LPD00016 CDS
T03071
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roa03032
]
Pd630_LPD00016
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD00016
Enzymes [BR:
roa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pd630_LPD00016
DNA replication proteins [BR:
roa03032
]
Prokaryotic type
DNA Topoisomerases
Pd630_LPD00016
DNA repair and recombination proteins [BR:
roa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pd630_LPD00016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHK27267
LinkDB
All DBs
Position
17634..20156
Genome browser
AA seq
840 aa
AA seq
DB search
MTDTTLPPEGPGHDRIEPVDIQQEMQSSYIDYAMSVIVGRALPDVRDGLKPVHRRVLYAM
YDNGYRPDRGYVKSARPVAETMGNYHPHGDASIYDTLVRMAQPWSLRYPLVDGQGNFGSR
GNDGAAAMRYTECRLTPLAMEMLREIDHETVDFTPNYDGRTQEPSVLPSRIPNLLINGSG
GIAVGMATNIPPHNLREVAEAIYWALENWEADEESTLTAVMERVKGPDFPTHGLIVGGQG
IHDAYTTGRGSVRMRGVVEIEEDAKGRTTIVITELPYQVNPDNLITSIAEQVRDAKIAGI
SDIHDESSDRAGMRIVVTVKRDAVAKVVLNNLYKHTQLQTSFGCNMLSIVDGVPRTLRLD
QMIRLYVAHQVEVIRRRTEYLLRKAEERAHILRGLVKALDALDEVIALIRASQTVDIARA
GLIELLTVDEIQADAILAMQLRRLAALERQKIIDELAEIEREIADLKDILEKPERQRRIV
RDELKEIVDKHGDDRRTRIIAADGDVADEDLIAREDVVVTITETGYAKRTKTDLYRSQKR
GGKGVQGAGLKQDDIVSHFFVSSTHDWLLFFTTKGRVYRAKAYELPEASRTARGQHVANL
LAFQPDERIQSVIQIKTYEDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAINLRGEDEL
VGAVLCSSDDDLLLVSAQGQSIRFSATDEALRPMGRATSGVQGMRFNGDDELLSLNVVRE
GTYLLVATSGGYSKRTGMEDYPVQGRGGKGVLTIQYDRKRGTLVGALIVNDDDELYAITS
GGGVIRTAAKQVRKAGRQTKGVRLMNLGEGDTLLAIARNADEPDEPDDNAESSGKGAKES
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacaacgttgccgccggagggaccggggcacgaccgcatcgagcccgtcgac
attcagcaggagatgcagagcagctacatcgattacgcgatgagcgtgatcgtgggtcgt
gcgctgcccgacgtgcgagacggcctcaagccggtgcaccgccgcgttctgtacgcgatg
tacgacaacggttaccggcccgatcgcggttatgtgaagtctgcgcgaccggtcgccgag
acgatgggtaactaccacccccacggcgacgcctcgatctacgacacgctcgtccgcatg
gcccagccgtggtcgctgcggtacccgctcgtcgacggccagggcaacttcggttcccgc
ggcaacgacggcgccgccgcgatgcgatacaccgagtgccgcctcactccgctggccatg
gaaatgctgcgtgagatcgaccacgagacggtcgatttcaccccgaactacgacggtcgt
acacaggaaccgtcagttctccccagccgtatccccaacctgttgatcaatggttccggc
ggcatcgccgtcggtatggccaccaacatcccgccgcacaacctgcgtgaggtcgccgag
gccatctactgggcgctcgagaactgggaagccgacgaggaatccaccctcaccgcggtc
atggaacgcgtgaagggacccgacttcccgacgcacggcctgatcgtcggcggccagggc
atccacgacgcctacaccaccggacgcggttcggtccgcatgcgcggtgtggtggagatc
gaggaggacgccaaggggcgcaccacgatcgtcatcaccgaactgccgtaccaggtgaac
ccggacaacctgatcacgtcgatcgccgagcaggtgcgcgacgcgaagatcgccggcatc
tccgacatccacgacgagtcctcggaccgcgcgggtatgcgcatcgtcgtcaccgtcaag
cgtgacgcggtcgcgaaggtcgtgctcaacaacctgtacaagcacacccagctgcagacc
agcttcggctgcaacatgctgtccatcgtcgacggtgtgccgcgcaccctgcggctcgac
cagatgatccggctctacgtcgcccaccaagtcgaggtcatccgcaggcgcaccgagtac
ctgctccgcaaggccgaggaacgcgctcacatcctgcgcggactggtgaaggcgctcgac
gccctcgacgaggtcatcgcgctgatccgggcgtcgcagaccgtcgacatcgcgcgggcc
ggcctgatcgagctgctcaccgtcgacgagatccaggccgacgcgatcctcgcgatgcag
ctgcgtcgcctcgccgccctcgagcgtcagaagatcatcgacgaactcgccgagatcgag
cgggagatcgccgacctcaaggacatcctcgagaagccggagcgtcagcgtcggatcgtc
cgcgacgagctcaaggagatcgtcgacaagcacggcgacgaccgccggacccgcatcatc
gcggccgacggtgacgtggccgacgaggatctgatcgctcgcgaggacgtcgtcgtcacg
atcaccgagaccggctacgccaagcgcaccaagaccgacctgtaccgctcgcagaagcgc
ggcggcaagggtgtgcagggtgccgggctgaagcaggacgacatcgtctcgcacttcttc
gtcagctccacgcacgactggctgctgttcttcaccacgaagggccgcgtgtaccgggcc
aaggcatacgagctgccggaggcgagccgcacggctcgcggacagcacgtggccaacctg
ctcgcgttccagcccgacgagcgcatccagagcgtcatccagatcaagacgtacgaggac
gccccctacctggttctcgccacccgcaacggtctggtgaagaagtccaagctcaccgac
ttcgactcgaaccgcagcggcggcatcgtggccatcaacctgcgcggcgaggacgaactg
gtcggcgcggtcctctgctcctccgacgacgacctgctgctcgtctccgcgcagggacag
tcgatccgcttctccgccaccgacgaggcgctgcgtccgatgggccgcgccacgtccggt
gtccagggcatgcgattcaacggcgacgacgaactgctgtcgctgaacgtggtgcgtgaa
ggcacctatctgctggtggcgacgtcgggtggctactcgaagcgcaccggcatggaggac
tacccggtccagggacgcggcggaaagggtgtactcacgatccagtacgaccggaaacgt
ggcaccctggtcggagcgctcatcgtgaacgacgacgacgagctctacgcgatcacgtcg
ggcggtggcgtcatccgcaccgccgccaagcaggtccgcaaggccggtcggcagaccaag
ggggttcgtttgatgaacctcggggaaggcgacaccctgctcgcgatcgcgcgcaatgcc
gacgaaccggacgaacccgacgacaacgccgagagcagcggcaaaggagctaaggagtcc
tag
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