Rhodococcus opacus PD630: Pd630_LPD00284
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Entry
Pd630_LPD00284 CDS
T03071
Name
(GenBank) Putative oligopeptide transport ATP-binding protein YkfD
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
roa
Rhodococcus opacus PD630
Pathway
roa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pd630_LPD00284
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roa02000
]
Pd630_LPD00284
Transporters [BR:
roa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pd630_LPD00284
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_16
AAA_13
NACHT
RsgA_GTPase
AAA_5
MeaB
AAA_29
ATP-synt_ab
AAA_25
AAA
nSTAND3
AAA_33
RNA_helicase
nSTAND1
PRK
Motif
Other DBs
NCBI-ProteinID:
AHK27531
LinkDB
All DBs
Position
284051..285061
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AA seq
336 aa
AA seq
DB search
MSESILKVRGLTKTFKVPANAAGKNQLRALDGIDLDLARGETLGLVGESGCGKSTLARTL
MMLERPDSGSVTWDGVDPFSLKGKDLLALRRRVQMVFQDPYASLNSRMSAADIIAEPWRT
HKTMYKTSRDRAARVRELLHLVGLRPSDEHRYPQEFSGGQRQRLGIARALALNPSVVICD
EPVSALDLSVQAQVLNLLNDLQKQLGISYVFISHDLSVVRHVADRVAVMYLGRIVESGAT
DAVFDRPAHPYTEALMSAAPKLDAESRGKRIILDGEVPSPLNPPSGCRFRTRCAHATDIC
ASTVPPAAVDERESGHVAECHHPRRPIELGVPVAVG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtcgattctgaaggtgcggggcctcaccaagacgttcaaggtgcctgccaac
gcggcgggcaagaatcagttgcgcgcgctcgacggcatcgacctcgacctcgcccgcggc
gaaacgctcgggctcgtcggcgaatcgggttgtggcaagtccactctcgcccgcacgctg
atgatgctcgagcggccggactccggttcggtgacgtgggacggcgtcgatccgttctcg
ctgaagggtaaggacctgctcgcgctgcgccgccgggtgcagatggtgttccaggacccg
tacgcatcgctgaactcccggatgtcggcggccgacatcatcgccgagccgtggcgcacc
cacaagacgatgtacaagacgagccgcgaccgggcggcgcgggtgcgggaactactgcac
ctggtgggtctgcggccgagcgacgagcaccgctacccgcaggagttctccggcggtcag
cgtcagcgactcgggatcgcccgcgccctggcgttgaacccgagcgtcgtcatctgcgac
gaacccgtgtcggcgctcgacctgtcggtgcaggcgcaggtgctcaacctgctgaacgac
ctgcagaagcagctcggcatctcgtacgtgttcatctcgcacgacctgtcggtggtccgg
cacgtcgccgaccgcgtcgccgtgatgtacctcgggcggatcgtggagtcgggtgcgacg
gacgccgtcttcgaccgtcccgcccacccgtacaccgaggccctgatgtcggcggcaccg
aagctggacgccgaatcccggggcaagcggatcatcctcgacggtgaagtgccgtcgccg
ctgaacccgccgtcgggctgccggttccgcacccgctgcgcccacgcgaccgacatctgc
gcgagcaccgtgccgcccgccgcggtcgacgagcgcgagagcggccacgtcgccgaatgc
caccacccccggcgtccgatcgaactcggcgtccccgtcgcggtcgggtga
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