Rhodococcus opacus PD630: Pd630_LPD00486
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Entry
Pd630_LPD00486 CDS
T03071
Name
(GenBank) Autoinducer 2-binding protein lsrB
KO
K10559
rhamnose transport system substrate-binding protein
Organism
roa
Rhodococcus opacus PD630
Pathway
roa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pd630_LPD00486
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roa02000
]
Pd630_LPD00486
Transporters [BR:
roa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
Pd630_LPD00486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AHK27730
LinkDB
All DBs
Position
486048..487124
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AA seq
358 aa
AA seq
DB search
MTRFRRTFVPLAGIVAVSIGLTACGGTTQDSASNSGGGDRATGTANPDAPIQDGLQVAFL
PKQLNNPYSDIEVGGGKTAVEEFGGEYKLVGPNDASASSQVSYINTLIQQGQNVINIAAN
DPNAVCPSLNQARDAGIKVVTFDSDAAEDCRDLFINQATTQGVGETLAKMTSEQIGGTGK
IAVLSATPNATNQNAWIEVLKSELASKPEYQNIELVATVYGNDDDQKSFQETQGLLQTYP
DLKAIVSPTTVGIAAAARYISSSSYKGNVVLTGLGTPNQMREYVKNGTVKEFALWDPTNI
GYLSAYAGAALASGQITGAEGQKFTAGKLGEYTIGAGGEVVLGPPTVFDANTIDQYNF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacccgattccgccggaccttcgttcccctggcggggatcgtcgcagtctcgatcgga
ctgacggcctgcggcggcaccacccaggattcggcgtcgaactcgggcggtggcgaccgt
gccaccggtaccgcgaaccccgacgcgccgatccaggacggtctgcaggtcgcgttcctc
cccaagcagctcaacaatccctactcggacatcgaggtcgggggcggcaagaccgcagtg
gaggagttcggcggcgagtacaagctcgtcggccccaacgatgcgagcgcgtcctcgcag
gtgtcctacatcaacacgctgatccagcagggccagaacgtgatcaacatcgcggccaac
gatccgaacgccgtgtgcccgtcgctgaaccaggcccgcgacgccggcatcaaggtcgtg
acgttcgattccgacgcggccgaggactgccgcgacctgttcatcaaccaggccaccacc
cagggcgtcggtgagacgctcgcgaagatgacgagcgagcagatcggcggcaccggcaag
atcgccgtgctgtccgcgacccccaacgccaccaaccagaacgcctggatcgaggtgctg
aagtccgagctcgcgagcaagccggagtaccagaacatcgaactcgtggccaccgtgtac
ggcaacgacgacgaccagaagtcgttccaggaaacgcagggcctcctgcagacctacccc
gacctgaaggcgatcgtgtcgcccacgacggtcggcatcgccgccgcggcccgctacatc
tcgtcgtcgagctacaagggcaacgtcgtcctcaccggcctcggtacccccaaccagatg
cgggaatatgtgaagaacggcaccgtcaaggaattcgccctctgggatccgaccaacatc
ggctacctctccgcctacgccggtgccgcactggcgtccggtcagatcaccggcgccgag
ggtcagaagttcacggcaggcaagctcggcgagtacacgatcggcgccggtggcgaggtc
gtactcggcccgcccaccgtgttcgacgcgaacaccatcgaccagtacaacttctga
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