Rhodococcus opacus PD630: Pd630_LPD01231
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Entry
Pd630_LPD01231 CDS
T03071
Name
(GenBank) hypothetical protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
roa03021
]
Pd630_LPD01231
Transcription machinery [BR:
roa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pd630_LPD01231
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
SnoaL_2
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
AHK28464
LinkDB
All DBs
Position
complement(1262007..1262894)
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AA seq
295 aa
AA seq
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MDDCDRLTERFEEHRPRLRAVAYRMLGSVTEADDAVQEAWLRMNRADTGDVDNLEAWLTT
VVSRVCLNVLRSREQRREEPLDVQAHDPVVGHEDGGDPEHEAVLADSVGLALLVVLDTLT
PAERLAFVLHDMFDVPFDDVAPIVGRSSPAVRQLASRARRRVKGVSPAPATADLERQRRV
VDAYLAATRGGDFDALVALLDPDVVLRADPAVGPTPAPLVIRGARVVARGALASSERARF
TQVALVNGAVGLVMALRGRLHLVLKFTIADGSITEIDVIAEPDRVRRLDLAVLGD
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtggacgactgcgatcggctgacggagcgtttcgaggaacaccggccccggctgcgggcc
gtcgcgtaccggatgctgggctcggtgaccgaagccgacgacgccgtccaggaggcgtgg
ctgcgcatgaaccgcgccgacaccggcgacgtggacaatctcgaggcgtggctgaccacc
gtggtgtcgcgggtgtgcctgaacgtgctgcgctcacgcgagcagcggcgcgaggaacct
ctcgacgtgcaggcgcacgacccggtcgtcggtcacgaggacggtggcgaccccgaacac
gaagcggtgctggccgactcggtcgggctggcactgctcgtggtgctcgacacgctgacc
ccggccgagcggctcgcgttcgtgctgcacgacatgttcgacgtgcccttcgacgacgtc
gcccccatcgtgggccgctcctccccggcggttcggcagctcgccagccgcgcccgccga
cgggtgaaaggagtctcgccggcaccggccacggcggatctggaacgccagcgccgcgtc
gtcgacgcctatctggccgcgacccgcggcggcgacttcgacgcgctggtcgccctgctc
gatccggatgtggtgctccgcgccgatccggctgtcggccccaccccggcgcctctcgtg
atccggggtgctcgcgtcgtggccaggggcgcgctcgcctcctcggaacgggcccggttc
acccaggtcgccctggtgaacggggcggtcgggctcgtgatggctctccgcgggcggttg
cacctggtgctgaagttcacgatcgccgacggcagcatcaccgagatcgacgtcatcgcg
gaacccgatcgcgtccgccgactcgatctcgcggttctcggtgactga
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